Strain | Pseudomonas stutzeri NF13 contig00038, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAGGCCCTGGAGCTGCAGGACGAGCTGCAGTGCAAGTACACCGGCGGCACCGTGTTGCACCTGTACATGGCCGAGCAGATTTCCTCGGCCGAGGCCTGC AAGAAGCTGGTACGCAATGCGCTGTCGCGTTACCGCCTGCCTTACCTGACGGTAACGCCCACCTTCTCGATCTGCCCGGTGCACGGTTATCTCGCTGGCG AGCACGAGTTCTGCCCGAAGTGCGATGAGGCGCTGCTGCACAAGCAGCAAGCCGAAGCGGCCCTGGCGGTCTGATCTGCGATCCCGTGTCACGCCGCTCC AAGAGGTGCGGCGCCGCATAATCAACCCTAAGCAAAAGGAGCGTCACCATGAACCCAGCCAGCCAACTGCCCCAGGACCAGCGCCAACGTTGCGAAGTCT GGACCCGCGTGATGGGCTATCACCGCCCGGTTACCGCATTCAATCCGGGCAAGCAGTCCGAGCATCGCGAGCGCCTGCATTTCACTGAAGCAGCGGCGCG
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DNA Sequence for Gene |
>B381_07481
GTGACCGCAGCACTTCGCGTCGGGGGGCTGGTCCCCCTGACCACACTGGATTTCCCCGACCATCTGGCCTGCGTGCTGTTCTGCCAGGGCTGCGGCTGGC GCTGCCGCTACTGCCACAATCCGCAGCTGATCCCGGCCTGTGGCAACGAGGAGAAGCCCTGGTCGGAGATTCTCGCCTTTCTCGAACAGCGCGTCGGCCT GCTCGAGGCGGTGGTGTTCAGCGGTGGCGAGCCGACCCTGCAGACCGCGCTGCCCGAGGCCATCGCCCAGGTGCGGGCGCTGGGCTACAAGGTCGGCCTG CACAGCGCCGGCATCAAACCGAAGTTGTTCGCCAACATCCTGCCGCTGGTGGATTGGGTCGGTTTCGACATCAAGGCGCTACCCGAGCACAGCAGCGCGA TCACCGGCGTGGATGGCAGCGGCAAGGCCAACTGGAAGAGTCTCGAACACCTGCTGGAAAGCGGCGTCGAGCATGAGTGCCGGACCACCGTGCACTGGCA ACTGTTCGACGCCGACATGCTGTGGGACATGGCTCAGCGCCTGCGCCGGCTGGGTGTCGAACGCTTCGCCGTGCAGTGCGTGCGCACCGCGCGCATGCTC GACGACAGCCTCGCCGAGAGCCGCGCACCCTACGATCAGCAGCGCCTGTGGGAGCGCCTGGATCGACTGTTCCCATCCTTCGTGCTGCGTGGATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGCTGCGGGGTGCCGCAACGGGCACCCCACTCAAGGCCTGATCGACCTCAGCTCCAGCCCCAGAACTGCAGCCACCAGCCATAGCCCACCAGCGCGCA ACCGGCATTGACGCAGGCGAACGCCAGCAGCCGGCGCATGCCGTTGCCGCCGTGACGGCTGATCACGTTCCACGCCAGGTACAGACTCCACGCCACGGCA CCGATCAGCAGCGCGGCGCGAGCCGGTTGCGCCCAGGCCAGTAGCAAGCCCTCGTAGCGCAGTAGCTTGACCGTGGTGGCGGACAGGCCGAGAAACAGCC CGGCGCCACCCAGCGGCACCAGTGCCAATGCGAGGTGCTGGAACACATTGTCGCCACGGCGCATTACCCGCACGGCGGCGCGCAGCAGTAGCCACAACGC GCCGCCGACGAGCAACGAGGCACCGAAGATGTAGGTGAGGATCACGGCGCCATCGAGCCAGGTGAAGGCATCGTTGGCCTGCGGATAGTGGGTCAGCAGC
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Amino Acid Sequence |
>radical SAM protein
MTAALRVGGLVPLTTLDFPDHLACVLFCQGCGWRCRYCHNPQLIPACGNEEKPWSEILAFLEQRVGLLEAVVFSGGEPTLQTALPEAIAQVRALGYKVGL HSAGIKPKLFANILPLVDWVGFDIKALPEHSSAITGVDGSGKANWKSLEHLLESGVEHECRTTVHWQLFDADMLWDMAQRLRRLGVERFAVQCVRTARML DDSLAESRAPYDQQRLWERLDRLFPSFVLRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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