Pseudomonas stutzeri NF13, B381_06986 (fliQ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri NF13 contig00038, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGAACCAGATCCTCATCGGTCTGACCCTCTTCCTCACGCTGTTCATCATGGCGCCGGTATTCGACCGGATAAACCAGGATGCCCTGCAGCCGTACCTCA GCGAGCAGATCCCGGCGCAGGAAGCGATCGCTCGCGCCGAGGTGCCGCTCAAGGGCTTCATGCTGGCGCAGACCCGCGAGAGTGATCTGGAGCTGTTCGT CAGGCTGTCGCGGCGCACCGACATCGCTTCGCCGGAAGCCGCACCGATGACCATCCTGGTGCCGGCCTTCGTCACCTCGGAGTTGAAGACGGCATTCCAG ATCGGTTTCATGATCTTCATTCCGTTCCTGATCATCGATATGGTGGTGGCCAGCGTGCTCATGGCGATGGGTATGATGATGCTCTCGCCGCTGATCATCT CGTTGCCGTTCAAGATCATGCTGTTCGTGCTGGTCGACGGCTGGGGGCTGATCATCGGCACGCTGGCCGGTAGCTTCGGCACGCTTTAGGAACCACGCCA
|
|
| DNA Sequence for Gene |
>B381_06986
|fliQ
ATGACTCCAGAAGTAGCGGTGGACCTGTTTCGCGAAGGGCTGTGGATGACGGCGATGATCGTTGGCGTGCTAGTGGTGCCGAGCCTGCTGGTCGGCCTGG TAGTGGCCATGTTCCAGGCCGCGACGCAGATCAACGAGCAGACCCTGAGCTTTCTGCCGCGCCTGCTGGTCATGCTGATGACGCTGATATGGGCTGGGCC ATGGCTGGTGCGTGAGCTGATGGAGTACACCCAGAACCTCGTCCAGAACATTCCGTTGCTGATCGGGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGCGTGCTTGAGCTGAGCAATGCGCAGATCGGCGGCTGGGTAGGGCAGTTCCTGCTGCCGCTGTTCCGCATCGCCGCCTTGCTGATGAGCATGCCGCTG ATCGGTACGCAGCTGGTGCCGATGCGGGTACGGCTGTACCTGGCCCTGGCCATCGCGCTGGTACTGGTGCCGACCTTGCCGGCCATGCCCGTGGTCGAGT CGCTCAGTCTGGCCTCGTTCCTGCTGATCGCCGAACAGTTGGTGATCGGTGTGATGCTGGGCTTCGTTCTGCAGCTGTTCTTCCACGTCTTCATCGTGTC CGGCCAGTTGCTGGCCATGCAGATGGGCCTGGGTTTCGCGTCGATGGTCGATCCGGCCAACGGTATCTCGGTGCCGGTGCTCGGTCAGTTCTTCAACATG CTGGTGATCCTGTTGTTCCTCTCGGTCAACGGTCATCTGGTGGTGCTGGAGATTCTCGCTGAGAGCTTCGTGACGCTGCCGGTAGGTGGTGGTCTGTCGA
|
|
| Amino Acid Sequence |
>flagellar biosynthesis protein FliQ
MTPEVAVDLFREGLWMTAMIVGVLVVPSLLVGLVVAMFQAATQINEQTLSFLPRLLVMLMTLIWAGPWLVRELMEYTQNLVQNIPLLIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|