Pseudomonas stutzeri NF13, B381_02907

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri NF13 contig00017, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACAGCCTGGGCGTGCTGCATGGCGACCTGAAACCGAGCAACGTGATGCTCGCCGATGACGGCCTGCGCCTGTTCGACTACGGCCTCGGCCAATCGCTGG AAGGCCTGCTGCCCGGCCTGCCGCGTCTGTGCCGCACGCGTTTTGCGGCCTGGACGCCGCGCTATGCGGCACTGGAGCTGCTCGACGGCAGCGAGCTGAC CGCCAGCGCCGATATCTACGCGCTGGCCTGCGTGCTCTACGAACTGGCCAGCGGCAGCCATCCGTTTCGCCGGCTCAGCGCCCGCCAGGCCAAGGCGATG GAACTGGACCGCGCCCTGCAACGACCGCCGCAACTGCCCGCGCACTGCTGGCCGGCACTGCGTCTGGCGCTGGCATTCGACGAGGCGCAGCGCAGCATCG ATGCAGCGGGCCTGTTGCACGCCTTCAGCCGCCCCGTACCGAGCCGCTGGCAGCGCTGGTTCGGGCACACCCATGGATGACATCAGGACAAGGAAAGCCC
DNA Sequence for Gene
>B381_02907
ATGTTCAACGCGGCCAACGAAACCCATTTCAGCCTCACCCTGGAAGGCGTCGCACACGATTTCAAGGTGCTCGAATTCCAGGGCCGCGAGGCCATCAGCC AGCCCTATCGCTTCGACCTGGAACTGGTCAGCGAGCGCCCCGACCTGGATCTACAGGCACTGCTGCATAAGCCCGCCTTTCTCGCCTTCGACCCCGCCGG CATGGGCATCCACGGCCTGGTCCACCGCATCGCCCAGGGTGAATCGGGCAAGCGCCTGACCCGCTACCGGCTCACGCTCGTGCCGCAGTTGGCCTATCTC GTCCACAGCACCAACCAGCGCATCTTCCAGCACCTCAGCGTGCCGCAGATCGTCGCCCAGGTGCTCGAGGAACACGGCATCCAGGCCAACGCCTACCGCT TCCAACTCGGCCCGGTGGTCTACCCACCGCGCGAGTATTGCGTGCAGTACGACGAATCCGACCTGCACTTCATTCAGCGTCTGTGCCAGGAAGAAGGTAT CCACTACCACTTCGAGCACAGCACGACAGGTCATGCGCTGGTCTTCGGCGATGATCAGACCAGCTTCGCCAGGCTCGGCCAGCCGACCGCCTATCTGCAG GACAACGGCATGACGGCCGACGAGCCGGTGATCAAGCGCTTCGCCGTGCGCGTCGCGACCCGCACCAGCCGCGTCAGCCGTCGTGATTACGACTTCGAAC AACCCAGGCTACTGATGGAAGCGGCCCATCGCGGCGAGCCGGCGGCGGACGCCATGCCGCAGCCCGACCTGGAAGACTACGACTATCCGGGCCGCTTCAC CGAACGCGCCCATGGCAAGCACCTGTCGCAACGCGCTTTGGAACGCCACCGCCACGACTACCGCCTGGGCGAGGGCAACAGCGACCAGCCGCGACTGGTC AGCGGCCATCTACTGGAAATCTCCGACCACCCGCGCCGCGAATGGAACGACCTCTGGCTGCTCACCGAGGTGCTGCATGAAGGCAAGCAGCCGCAGGTGT TGGAGGAGTCGGTACTGGAGCTCCCCTCTCCCTCCGGAAGAGGGGCTGGGGGGGAGGGCGCTCCAGGCAACGCTCAGTTCCATCAGGGCTACCGCAACCG CTTCAGCGCCACGCCCTGGGACATCCCCTTCCGCCCGGCCCTTCACCATCCTAAACCGAAGGTGCTCGGTAGCCAGACCGCCGTGGTCACCGGCCCCGCC GGCGAAGAGATCCACTGCGACGAGTACGGCCGCGTAAAAGTCCAGTTCCACTGGGATCGCGAAGGCCAGGCCGACGACAAGACCAGCTGCTGGCTGCGCG TCTCCTCCAGCTGGGCCGGCGACCGCTACGGCGGCATCGCCATCCCGCGGGTCGGCATGGAGGTGCTGGTGACCTTCCTCGAAGGCGATCCCGACCAGCC GCTGGTGACCGGCTGCCTGTACCACAAGGAGCATCAGGTCCCCTACGACCTCCCGGCCAACAAGACCCGCACGCTGTTCAAGACCCTGAGCAGCCCGGGC GGTGGCGGCTACAACGAACTGCGCATCGAAGACCGCCAGGGCGCCGAGCAGATCTACGTCCACGCCCAGCGCGACTGGGACGAGAACATCGAGCACGACC AGAAGATCCGCGTCGGCCACGAACGCCACGAAACCGTCGAAGCCAACAGCTACAGCGAGTTCCGCGCCGAGGAGCACCTCATCATCGCAGGCGATCGCAA GGTCGAAGTCAAACCCGACGACCACCTCACCATCGCCCAGACCCAGCACATCAAGCTCGGCACCGCCCAGCTGACCAGGGCCGGCCGCGAGATACACCTC AAGGCCGGGCAGAAAATGGTCATCGAAGCCGGCGTCGAACTGACCCTCAAGGCCGGCGGCAGCTTCATCAAGCTCGACCCCGGCGGCATCACCGTCTCCG GCCCGCTGGCGCGAATCAACGCCGGCGGCGCACCGGGCAAGGGTTCGGGGATCAAGATCAAATCACCGGTGCTACCGGGAATGGCAGATAGCGACAAGGC CGGAAGCCTACTAGAGCAGGCAATGCCGGGTAAGGCGGACAGCTTGCTCAGCAAACGCAAGCGCTCGCTCAATTTTTCAGGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAACAGGACAGAGCCGGCTGCGCAGCCGGCTCGAACGCAAGGAAGCATCGAACATGGCCGAACACAAGCCGATCAATTGGGCTTATCCGTTTCCCAGCAA GGACACCAGCCACAATCCGCTGCAACTGCTTACACATATGGCCCAGGCCAAAGGCGGGTTCTACCCCACCGGCGAAAACGGCTTATGGCATGGCGGCGTG CATTTCGACGAAGGCACGGCCGCTGTATTCGACCAGTCGAGCGTGCGCTGTATCGCCGACGGCGAGGTGATTGCCTACCGCATCGACCAGCGCTACCCGG TCAGCGAATTCACCGACGAGATTCCCTTGGTCAAACGTGCGCCCTTTTCCACGGGGTTCGTGCTGGTCAAGCACAGCCTGCAGCCGCCGCCACTGAAGAA CGCTGACGGCAGCATCGTCGAAGGACAAACCCCTCCAAGCCTCACCCTCTACAGCCTGTACATGCACCTGCTGGATTGGGCGGGCTACCAGGCACAAGCG
Amino Acid Sequence
>Rhs element Vgr protein
MFNAANETHFSLTLEGVAHDFKVLEFQGREAISQPYRFDLELVSERPDLDLQALLHKPAFLAFDPAGMGIHGLVHRIAQGESGKRLTRYRLTLVPQLAYL VHSTNQRIFQHLSVPQIVAQVLEEHGIQANAYRFQLGPVVYPPREYCVQYDESDLHFIQRLCQEEGIHYHFEHSTTGHALVFGDDQTSFARLGQPTAYLQ DNGMTADEPVIKRFAVRVATRTSRVSRRDYDFEQPRLLMEAAHRGEPAADAMPQPDLEDYDYPGRFTERAHGKHLSQRALERHRHDYRLGEGNSDQPRLV SGHLLEISDHPRREWNDLWLLTEVLHEGKQPQVLEESVLELPSPSGRGAGGEGAPGNAQFHQGYRNRFSATPWDIPFRPALHHPKPKVLGSQTAVVTGPA GEEIHCDEYGRVKVQFHWDREGQADDKTSCWLRVSSSWAGDRYGGIAIPRVGMEVLVTFLEGDPDQPLVTGCLYHKEHQVPYDLPANKTRTLFKTLSSPG GGGYNELRIEDRQGAEQIYVHAQRDWDENIEHDQKIRVGHERHETVEANSYSEFRAEEHLIIAGDRKVEVKPDDHLTIAQTQHIKLGTAQLTRAGREIHL KAGQKMVIEAGVELTLKAGGSFIKLDPGGITVSGPLARINAGGAPGKGSGIKIKSPVLPGMADSDKAGSLLEQAMPGKADSLLSKRKRSLNFSG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site