Pseudomonas sp. M47T1, PMM47T1_26288 (nadD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. M47T1 contig035, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TATCTGCGGCGCCATGGAAACCCTGCTGGTGGACGCGGCCGTGGCCGCCGACTTCCTGCCGGCCATGGCTGCGCAGTTCGCCGAAAAAGGCGTGGAGCTG CGCGGTTGTGAACGCACCCGTGACATCATCCAGGCCGTGCCGGCCACCGAAGCGGATTGGCACACCGAATACCTGGCGGCGATCCTGTCCATTCGCGTGG TCGACGGCCTGGACCAGGCCATCGCCCACATCAATCATTACGGCTCGCACCACACGGACTCCATTGCCACCGAGAACCTGGGCGAGGCTCGGCGCTTCAC CGCCGAAGTCGACTCGGCTTCGGTGATGATCAACACCCCGACCTGCTTTGCCGATGGCTTCGAGTATGGCCTGGGTGCGGAAATAGGCATCTCCACGGAC AAAATCCATGCCCGTGGCCCGGTTGGCCTGGAAGGCCTGACCTGCGAGAAATACATTGTGGTCGGTGACGGTCAGTTGCGCGGCCAGGAGCCCGTCTGAC
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| DNA Sequence for Gene |
>PMM47T1_26288
|nadD
TTGGGTGACCTGAGCCAGCCTGGCAACAAGCCCGCGCCACGCCGTATCGGCGTGCTGGGCGGGACCTTCGACCCGGTGCATATCGGTCACCTGCGCAGCG CGCTGGAAGTGGCCGATGCCCTGCACCTGGACGAATTGCGCCTGACCCCCAATGCCCGGCCCCCGCATCGCGACACCCCCCAGGTGACGCCGCAGGACCG CCTGGCGATGGTGCAATGCGCGGTGCAAGGTGTGGCGCCGTTGACGGTGGATGCCCGGGAGCTGCAACGGGACAAGCCGTCGTACACCATTGATACGCTG GAGCTGATGCGCGCGGAACTCGCCGCTGATGACCAGCTGTTTCTGCTGCTGGGCTGGGATGCCTTCTGTGGCCTGCCTTCCTGGCATCGCTGGGAAGAAC TGCTGCAGCACTGCCATATTCTGGTATTGCAGCGGCCTGACGCCGACAGCGAGCCGCCGGATGCCTTGCGCAACCTGCTGGCCGCGCGGTCGGTCAGCGA CCCGTTGGCCCTTGATGGGCCTGGCGGGAATATTACTTTCGTCTGGCAGACACCCCTGGCGGTGTCGGCCACCCAGATCCGTCAACTGCTGGCCAGCGGG AAGTCGGTACGTTTCCTGGTGCCTGACGCGGTACTGGCCTACATCGAGGCGCACGGGCTGTACCGTGCGTCCAATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACTGAACGAGTTTTATATGACCAAGCAAAAAATCAGCGTGTCCGGCGAAGAGCTGGTTGAACTGGCCAAGGCCGCCCTGGAAGACGTAAAGGCCCAGGAC ATCCTGGTCATCGACGTGAAAGACAAGCACAGCCTGACCGACTACATGGTGATCGCCACCGGTACCTCGAACCGCCAGATCAACGCCATGCTCGACAAGG TGCGCGAGAACGTCAAGGCCAAGGGCGCACAGCCTCTGGGCGAAGAAGGCAAGGGCGAAAGCGACTGGGTACTGCTGGACCTGGGCGACGTCATCGTGCA CATGATGACGGCCGCTGCTCGCCAGTTCTACGACCTGGAACGCCTGTGGCAGGGCGCCGAGCAGAGCCGTGCCGCCAGCGGCGCGCACCACACCCCAGGC AACGAATAAGGCCGGGCCATGCGTCTGCGTCTGATTGCGGTCGGCTCGCGCATGCCGAAGTGGGTGGAAGACGGTTGGCATGAATACGCCAAGCGTCTGC
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| Amino Acid Sequence |
>nicotinic acid mononucleotide adenylyltransferase
MGDLSQPGNKPAPRRIGVLGGTFDPVHIGHLRSALEVADALHLDELRLTPNARPPHRDTPQVTPQDRLAMVQCAVQGVAPLTVDARELQRDKPSYTIDTL ELMRAELAADDQLFLLLGWDAFCGLPSWHRWEELLQHCHILVLQRPDADSEPPDALRNLLAARSVSDPLALDGPGGNITFVWQTPLAVSATQIRQLLASG KSVRFLVPDAVLAYIEAHGLYRASN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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