Pseudomonas sp. M47T1, PMM47T1_25713
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. M47T1 contig033, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATCAAGAGCCGGACCTTCCTGGCCGAACTGATGCCCCATTACCCGATCTACGTGCCGCTGCTGCCCGATGCCGCCCAGGAAGCCATGGGCCAGGTGCAC CCGCGTGCGCAGATCACTTTCGACATCCTGATGCGCGAGGGTTTCGAGACCGACCACTACATCGACATCTTCGACGGTGGCCCAACGCTGCATGCGCGCG TTTCAGGCATTCGCTCCATTGCCCACAGCCGCGTGGTACCGGTGAAGCTCGATGGCGGCGCCAGCGACGTGGTCAAGGGCGCGCGCCCTTACCTTGTGGC CAATGCCCAGTTGCAGGATTACCGCGCCGTATTGCTGGAGCTGGACTGGGTGCCTGGCAAGCCGGTGAGCCTGAGCCTGGAGGCTGCCGAAGCGCTGGGT GTGGGTGAGGGCGCCAGTGTGCGCCTGGTAGCTGTTTGATACCTGTCATTCACAGGTCGAGTTCTGCGAGCTGCCCGAGCCGCTCGCGCAAGGAGAAAGC
|
|
| DNA Sequence for Gene |
>PMM47T1_25713
ATGATCGTTCGTCCCGTACGCAGCAGCGATTTACCCGCGCTGATTGAGCTTGCGCGCAGCACCGGCACCGGCCTGACCACCTTGCCGGCCAACGAGGAGC GCCTGGCGCACCGCGTGGGCTGGGCCGAAAAGACCTTCCGCGGTGAGGCCGGGCGCGGCGACGCCGACTATCTGTTCGTGCTGGAAGACGACGACGGCCA GGTGGTGGGCATTTCTGCCATCGCCGGCGCCGTCGGCCTGCGCGAGCCCTGGTACAACTACCGGGTGGGCCTGACGGTCAGCGCCTCTCAGGAGCTGAAC ATCTATCGGGAAATCCCGACGTTGTTCCTGGCCAACGATCTGACTGGCAACTCCGAGCTGTGCTCGCTGTTCCTGCGCAGCGAGCACCGTACCGGCCTCA ATGGCCGCCTGTTGTCCAAGGCGCGGCTGATGTTTATCGCCGAATTCCCGCAACTGTTCGGCAACAAGATCATCGCCGAGATGCGCGGCATGTCCGACGA GCACGGTCGTTCGCCGTTCTGGGAAAGCCTGGGCCGGCACTTCTTCAAGATGGAGTTCAGCCAGGCGGACTACCTGACCGGTGTGGGCAACAAGGCGTTC ATCGCCGAACTGATGCCCAAGTTTCCGCTGTACACCTGTTTCCTGTCGCCCGCAGCCCGCGAGGTAATTGGTCGCGTGCACACCGATACCGAGCCGGCGC TGACCATGCTCAAGGGCGAGGGCTTCAGCTATCAGGGCTACGTCGATATTTTCGACGCGGGGCCTGCGGTGGAATGCGAAACCGCGAAGATTCGCGCCGT GCAGGACAGCGAGGCGCTGGTGCTGGCCATCGGCACGCCCGGTGACGACGCCACGCCATTCCTCATTCACAACCGCAAGCGCGAAGATTGCCGTGTTACC GCGGCGCCGGCACGCCTGGCAGCCGGCACCCTGGTGGTCGACCCGTTGACTGCCAAGCGCCTGCGCCTGAGCGCGGGTGACCAGGTGCGGGCGGCAAGCC TGTCGCCCCAGCTTCCACGGGAGGTGCGCAAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAGTCTGTACGTGGCCGGCCAATGGCTGGCAGGCGAGGGCGAGGCCCTTGAATCGCTCAACCCGGTGACCCAGGCCGTGCTGTGGCAAGGCCGTGCGGC CAGTGCCGGGCAGGTCGACCAGGCCGTGTTCGCCGCGCGCCACGCCTTTGTGAGCTGGGCCTCGCGATCGCTGGACGAGCGTATTGGCGTGCTGGAAACC TTCGCCGTGAAGCTCAAGGAGCGCGCCGATGAGCTGGCGCGCTGCATCGGCGAGGAAACCGGCAAGCCGCTGTGGGAAGCGGCCACTGAGGTGACCAGCA TGGTCAACAAGGTTGGCATTTCCATCCAGAGTTACCGTGAGCGTACTGGCGAAAAGAGCGGCCCCCTGGCCGACGCCACCGCCGTGCTGCGGCACAAGCC CCACGGCGTGGTCGCCGTGTTCGGCCCGTACAATTTCCCTGGGCACCTGCCCAATGGCCATATCGTTCCTGCGCTGTTGGCCGGCAACGCGGTGCTGTTC
|
|
| Amino Acid Sequence |
>arginine succinyltransferase
MIVRPVRSSDLPALIELARSTGTGLTTLPANEERLAHRVGWAEKTFRGEAGRGDADYLFVLEDDDGQVVGISAIAGAVGLREPWYNYRVGLTVSASQELN IYREIPTLFLANDLTGNSELCSLFLRSEHRTGLNGRLLSKARLMFIAEFPQLFGNKIIAEMRGMSDEHGRSPFWESLGRHFFKMEFSQADYLTGVGNKAF IAELMPKFPLYTCFLSPAAREVIGRVHTDTEPALTMLKGEGFSYQGYVDIFDAGPAVECETAKIRAVQDSEALVLAIGTPGDDATPFLIHNRKREDCRVT AAPARLAAGTLVVDPLTAKRLRLSAGDQVRAASLSPQLPREVRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|