Pseudomonas sp. M47T1, PMM47T1_25598

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M47T1 contig033, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGAACTGGGTGACAGCGGCAACGCCCCGGCACGCCCGCATTTCGCCGAATTCCTGGTGCGCCAGACCTACGTGAAAGACCGTGCCGAAGCCTTCCGCAAG TGGCTGGGTGCCGGCAAGCTGGGTGACGTCAAGCAGCATTGGCCCACCCTGGAAGACACCGTCGGCACCCTGCGCGCCTCGGGCGCCTGGGTCAGCCTGG CACACCCGCTGCACTACGATTTCACCCGCAGCAAGCGCCGCAAACTGATTGCCGACTATATTCAAGCAGGTGGTCAGGCGATCGAAGTGGTCAATGGTAT GCAGCCTGCCGAGCAGGTGGGTACCTTGTCGATCCTGGCGCGCGAGTTTGGTCTGCTGGCCAGCGCCGGCAGTGATTTCCATGGGCCGGGGGCCTGGTCC GAGATCGGTATTTACCGACCTGTGCCGGAGGATCTGCCACTTTTGGCGGGTCGATTCAAACATGAGCAGCCACTCGTCGTCTGACCAACAGGTAGAGAAC
DNA Sequence for Gene
>PMM47T1_25598
GTGAGTCAATTCTTCCAGATTCATCCGGAAAATCCGCAGTCGCGCCTGATAAAGCAGGCCGTGGAGATCATCCGCAAGGGCGGGGTGGTGATTTACCCCA CGGACTCGTCCTACGCCATGGGTTGTCAGATCGGTGACAAGGGCGCCATCGAGCGCGTTCGCCGTCTGCGCAAACTGGACGACAAGCACAACTTCACCCT GATCTGCCGCGACCTGTCGCAACTGGGCCTGTTCGCCAAGATCGACACCGGCGCGTTCCGCCTGCTCAAGGCCCACGTGCCCGGCCCCTATACCTTCATC CTCAACGCCACCCGCGAGGTGCCGCGCTTGTTGCTGCACGACAAGCGCCGCACCATCGGCCTGCGGGTGCCGAATCATCCGATTTCCCACGCCTTGCTGG AAGAACTGGGCGAGCCGTTGATGAGCGTGAGCCTGATCATGCCGGGCGAGACATTGCCCATGACCGACCCCTACGAGATGCGCCAGTTGCTGGAGCATCA GGTGGACCTGATCATTGATGGCGGTTTTGGCGGGGTATCGGCGTCCACGGTCATCAACCTGGCTGACGGCGAGCCTCAGGTAGTGCGCGTTGGCTGCGGC GACCCGTCGCCCTTCATGGCCGAGGCGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGACGTGACCGTGGCGCACACCACTGCCGACCTTGAACCCGCCCGCGTCCCCGAGCAACTGGCGCTGGTGTATGGGCAGTCCTACACCGAAATGCCCGT GGACCTGTACATCCCGCCGGACGCCCTGGAGGTGTTCCTGGATGCCTTCGAAGGCCCTCTGGACTTGTTGCTGTACCTGATTCGCAAACAGAACATCGAC ATCCTCGATATCCCGGTGGCGGAAATTACCCGTCAGTACATGGGCTATGTGGAGTTGATGAAAAACGTGCGCCTGGAATTGGCGGCCGAGTACCTGGTGA TGGCGGCCATGCTCGCCGAGATCAAGTCGCGCATGTTGCTGCCGCGCTCGGCCGAGGCCGAGGTGGAGGAAGATGACCCGCGGGCCGAGCTGATTCGGCG GTTGCAGGAGTACGAGCGGTTCAAGGCGGCGGCGCAAGGCCTGGACGGTTTGAAGCGGGTGGGGCGTGATATTTACGTTCCGCAACTGGATGCGCCCCAG
Amino Acid Sequence
>translation factor Sua5
MSQFFQIHPENPQSRLIKQAVEIIRKGGVVIYPTDSSYAMGCQIGDKGAIERVRRLRKLDDKHNFTLICRDLSQLGLFAKIDTGAFRLLKAHVPGPYTFI LNATREVPRLLLHDKRRTIGLRVPNHPISHALLEELGEPLMSVSLIMPGETLPMTDPYEMRQLLEHQVDLIIDGGFGGVSASTVINLADGEPQVVRVGCG DPSPFMAEA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site