Pseudomonas sp. M47T1, PMM47T1_23924

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M47T1 contig029, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AACCAGGGTGATGCGCTGGTTCACTCGACTCGCAAGATGGTCGCTGACGCAGGTGACAAGGTCACTGCTGAAGAGAAAACCGCCATCGAAGCGGCCGTGG TTGCCCTGGAAGCCGCTGTCAAAGGCGACGACAAGGCTGCCATCGAGGCCAAGGTTGAAGAGCTGTCGAAAGTCAGCGCGCCGGTTGCCCAGAAGATGTA CGCCGAACAGGCTGAACAGCCTGCCGGTGCTGCGGCACAGCCTGCTGAAGAAGCCGGCAAGCACGACGATGTCGTCGACGCCGAGTTCGAAGAAGTCAAA GACCACAAGTAAGTACTGCTTGTTGTCGGCCAGTTGACTGTCGTTTGGCAGTCACTGGTAGGATGTCGCCGCGCGGGAGCTTGCTCCCGCGTTGGCGTGT CTGGAATAGACGAATTTTTACAGCATGCGACAGAGTCGGATGTTGTCGGCACGGTCGCAGGCGCCTTTGCGCTGTGACGTCCTGAAGAGTAAATAGAATT
DNA Sequence for Gene
>PMM47T1_23924
ATGTCAAAGCGTGACTTTTATGAGGTTCTAGGGGTCGAGCGCGGCTCCAGCGATGCCGATCTGAAAAAGGCTTATCGCCGCCTGGCGATGAAGCACCACC CGGACCGCAACCCGGGCGATAAAGCGTCGGAAGACCTGTTCAAGGAAGCCAACGAGGCTTACGAGGTACTGTCCGACTCCAGCAAGCGCGCAGCCTATGA CCAGTACGGTCATGCCGGCGTCGACCCAAGCATGGGCGGCGGCGGTGGCTTTGGTGGCGGTGGCGCCAACTTCTCCGATATCTTCGGCGACGTATTCAGT GATTTCTTCGGTGGCGGCGGCCGTGGCGGTTCTCGTGGCGGCGCCCAGCGTGGCAGCGACCTGCGCTACACCCTGGAACTTAACCTGGAAGAAGCCGTGC GCGGTACCACGGTCAGCATCCGGGTGCCTACCCTGGTCAACTGCAAGCCGTGCGACGGTTCGGGCGCCAAGAAGGGCTCGGCCCCGGTCACCTGCCCAAC CTGCGGCGGTATCGGCCAGGTGCGCATGCAGCAAGGCTTCTTCTCCGTGCAGCAGACCTGCCCGCGCTGCCATGGCCAGGGCAAGATCATTTCCGACCCG TGCGATTCATGCCGTGGTGAAGGCCGCGTTGAAGAGTACAAGACCTTGTCGGTGAAAGTGCCGGCTGGCGTCGACACCGGCGACCGCATCCGCCTGTCGG GCGAGGGTGAAGCCGGTACGCAGGGTGGCCCTACCGGCGACCTGTACGTGGTGATCAACGTGCGCGAGCACGATATCTTCCAGCGCGACGGCAAGCACCT GTACTGCGAAGTACCGATCAGCTACACCGAGGCGGCATTGGGTGGCGAGTTGGAAGTGCCTACCCTGGACGGCCGCGTCAAGCTCAAGATCCCGGAAGGC ACCCAGACCGGCAAGCAGTTCCGCCTGCGTGGCAAGGGCGTGGCCCCGGTACGCGGTGGTGGTGCGGGCGACCTGATGTGCCGCGTGGCGGTGGAAACCC CGGTCAACCTCAGCCGCCGTCAGCGTGAACTGCTGGAAGAGTTCCGCGGCACCTTGGAAGGTGACAGCTCGCATTCGCCCAAGGCCAGCGGCTGGTTCGA AGGCATGAAGCGTTTCTTCGGCGATTTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGCCTGGCATGAGACGTATCGCAGTGATGGGCGCTGCCGGGCGCATGGGCAAGAACCTGGTGGAGGCTGTTCAGCAGCGCGCGCCGTTGACCGGGCTG ACCGCGGCGATTGTTCGTCCGGGCAGCACCATGATCGGTGCCGATGCCGGCGAGTTGGCTTCGCTGGGCCGTATTGGCGTGCAACTGACGGCGAACCTGG AGCAGGTGGTCGACGAGTTCGACGTGTTGATCGACTTCACGCTGCCAGAGGTGATGCTGAAAAACCTGGCTTTCTGCCGCAAGGCGGGCAAGGCCATGGT CGTCGGCACCACGGGGCTGAATGCCGAACAGAAGGCGCTATTGGCCGAAGCGGGCCAGGACATTGCGATTGTCTTCGCTTCCAACTTCAGCGTGGGCGTG AACCTGTCGTTCAAGCTGCTGGACCTGGCGGCGCGGGTGATGGGCGAGGATGCGGACATCGAGATCATCGAAGCGCATCACCGCCACAAGGTGGACGCGC
Amino Acid Sequence
>molecular chaperone DnaJ
MSKRDFYEVLGVERGSSDADLKKAYRRLAMKHHPDRNPGDKASEDLFKEANEAYEVLSDSSKRAAYDQYGHAGVDPSMGGGGGFGGGGANFSDIFGDVFS DFFGGGGRGGSRGGAQRGSDLRYTLELNLEEAVRGTTVSIRVPTLVNCKPCDGSGAKKGSAPVTCPTCGGIGQVRMQQGFFSVQQTCPRCHGQGKIISDP CDSCRGEGRVEEYKTLSVKVPAGVDTGDRIRLSGEGEAGTQGGPTGDLYVVINVREHDIFQRDGKHLYCEVPISYTEAALGGELEVPTLDGRVKLKIPEG TQTGKQFRLRGKGVAPVRGGGAGDLMCRVAVETPVNLSRRQRELLEEFRGTLEGDSSHSPKASGWFEGMKRFFGDL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site