Pseudomonas sp. M47T1, PMM47T1_23782 (clpP)

Gene Feature Overview

Strain	Pseudomonas sp. M47T1 GCF_000263855.1|latest
Locus Tag	PMM47T1_23782
Name	clpP
Replicon	contig028
Genomic location	82412 - 83053 (- strand)

Cross-References

RefSeq	WP_008373810.1
GI	495649231
INSDC	EIK94133.1
NCBI Locus Tag	PMM47T1_23782
UniParc	UPI0002607DE3
UniProtKB Acc	I4MY43
UniProtKB ID	I4MY43_9PSED
UniRef100	UniRef100_I4MY43
UniRef50	UniRef50_Q9I2U1
UniRef90	UniRef90_Q48KZ0

Product

Feature Type	CDS
Coding Frame	1
Product Name	ATP-dependent Clp protease proteolytic subunit
Synonyms
Evidence for Translation
Charge (pH 7)	-3.93
Kyte-Doolittle Hydrophobicity Value	-0.161
Molecular Weight (kDa)	23.5
Isoelectric Point (pI)	5.61

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003596 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMM47T1_23782 Search term: clpP Search term: ATP-dependent Clp protease proteolytic subunit

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000245816 caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:HGNC Symbol;Acc:HGNC:2084] E-value: 2.4e-59 Percent Identity: 56.9

References