Pseudomonas sp. M47T1, PMM47T1_23562

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M47T1 contig028, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGCCACGTTGACCCGCGGGTGGCGGTCGCGAAAGGTCTTCAGGGCCGCGGGCAGCAGGTTGCCGGCGAAGGAGGGCATGGCAGCGATCGAGACTTTGCC GGTTTGCAGGGTGAAGTGCTGGCGCAGCAGTTCCTCGGCGTTGTCCCAGTCGGCCAGTAACTGGCGGGCCAGCGGCAGCAACGTTTCGCCTTCCGGGGTA AGGGCCACGCTGCGGGTGGTGCGGGTCAGCAGCGGGCCGCCCAGGTCCTCTTCCAGGGCCTTGATGGTCAGGCTCAACGCAGGCTGGGACAGGTGCAGGC GTTCCCCTGCCTGGGCGAAGCTCAGGGCCTGGGCCACGGCCAGGAACGCGCGGAGTTGCTTGATGTTCATTGTTTTGAAAACTCAATCAATCCATCAGAA AAACAAAATTAACAAATAACTCGGTTGGCGAGAAGATGGGGCTACCACGCGACTGGGCTAAGCTGGCACTAGCCCGATAACTACAAAAAGGCGAATCGAC
DNA Sequence for Gene
>PMM47T1_23562
ATGGCAGGACTCGACAAACGAGTGGCAACCTGGGAAGAGGCCCTGGCAGGCCTTACCGATAACATGACGGTGTTGTCCGGGGGCTTTGGCCTGTGCGGCA TCCCGGAAAACCTCATTGCGCAGATCAGGCGCATGGGCGTGCGCGGGCTGACCGTGGTCTCCAACAACTGCGGCGTCGACGGCTTTGGCCTGGGCGTGCT GCTGGAAGACCGGCAGATCCGCAAGATGATCGCCTCCTACGTGGGTGAAAACGCCTTGTTCGAGCGCCAGTTGCTGGACGGCGAACTGGAAGTGGAACTC ACCCCCCAAGGCACCTTGGCGGAAAAAATGCGCGCCGGTGGCGCCGGCATCCCGGCCTTCTACACCGCCACCGGCTACGGAACGCCGGTGGCCGAAGGCA AGGAAGTGCGCGAATTCAACGGCCGCAAGTACATCCTTGAAGAAGCCATCACCGGTGACTTCGCCATCGTCAAGGGCTGGAAGGCGGACCACTTCGGCAA CGTCATCTACCGCCACACCGCGCAGAACTTCAACCCGCTGGCCGCTGCCGCCGGCAAGATCACCGTGGTGGAAGTGGAAGAAATCGTCGCCCCCGGCGAA TTGCCGCCCAGCCAGGTCCACACCCCCGGCATCTACGTGGACCGGGTGATTCTCGGCACCTTTGAAAAGCGCATCGAAAAGCGCACCGTCAAGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCCTGGCCCAGAACAACAAGAGGTTTTGCACATGGCACTGACCCGCGAACAAATGGCCCAGCGTGTGGCCCGCGAACTCAAGGATGGCTACTACGTGAA CCTGGGGATCGGCATTCCGACCCTGGTGGCCAACTATGTCCCCGACGACATTGACGTGATGCTGCAGTCGGAAAACGGCCTGCTGGGCATGGGCGAGTTT CCCACCGAGGACACCCTCGACGCCGACATGATCAACGCCGGCAAGCAGACGGTTACCGCCCGCGCCGGCGCCTCCATCTTCAACTCTGCCGAGTCCTTCG CCATGATCCGTGGCGGCCACGTCGACCTCACCGTGCTGGGCGCCTTCGAGGTGGACGTGCAGGGCAACATTGCCTCGTGGATGATCCCCGGCAAGCTGGT AAAGGGCATGGGCGGCGCCATGGACCTGGTGGCCGGTGCCGACAACATCATTGTCACCATGACCCATGCGTCGAAGGACGGCGAGTCGAAGTTGCTGCCC
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MAGLDKRVATWEEALAGLTDNMTVLSGGFGLCGIPENLIAQIRRMGVRGLTVVSNNCGVDGFGLGVLLEDRQIRKMIASYVGENALFERQLLDGELEVEL TPQGTLAEKMRAGGAGIPAFYTATGYGTPVAEGKEVREFNGRKYILEEAITGDFAIVKGWKADHFGNVIYRHTAQNFNPLAAAAGKITVVEVEEIVAPGE LPPSQVHTPGIYVDRVILGTFEKRIEKRTVKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site