Pseudomonas sp. M47T1, PMM47T1_21598

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M47T1 contig023, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCAAAGGTATTTGGTGACGAGCGCGGCTTCTTCTACGAAAGCTTCAATGCCAAGGCGTTCGAGCAGGCCACCGGCATCACTGATGCTTTCGTGCAGGACA ACCATTCACGCTCCCAGAAAGGCGTGTTGCGCGGCCTGCATTACCAGATCGAAAACGCCCAGGGCAAACTGGTGCGGGTGACGGCCGGTGAAGTGCTGGA CATGGCCGTGGACATTCGTCGCAGCTCGCCCACATTTGGCAAGTGGGTAGGCGTGCGCCTGAGCGCGGAGAACAACCGGCAATTGTGGGTACCCAAGGGC TTTGCCCATGGTTTCGTGGTGCTCAGCGACTATGCTGAGTTCTTGTACAAGACCACCGACTACTACACCCCTTCTGCCGAACGCTGTATTCGCTGGGACG ACGAGACCCTGAAGATCGACTGGGAGCTCGGCGGCATCGTTCCCCAGCTGTCGGCCAAGGACCAGCAAGGCAAATCCCTGGAAGAGGCTGACCTATTCCC
DNA Sequence for Gene
>PMM47T1_21598
ATGACCCAAAAGATCCTCATCAGCGGCCAGTTCGGCCAGGTGTCACGCGAACTGCAGCAACGCCTTGGGCATCTGGGCGAATTGCACGTGCTGGGTCGCG ACAAGCTGGACCTGGCCCAGCCCGAAGGTATCCGCGAGGTGGTGCGCACCCTGCGCCCCACCCTGATCATCAACGCTGCCGCGCACACGGCAGTGGACCA GGCGGAGACGGAAGAGGACCTGGCGTTCGCCATCAACGCCACCGCGCCGCGCCTCTTTGCCGAGGAAGCGGCGGCACTGGACATACCGTTGATTCACTAC TCTACCGACTATGTGTTCGACGGTCGCAAGGACGGTGCCTACAACGAGGACGACGAAACCAACCCGCTGGGCGTCTACGGGCGCAGTAAGCTGGAAGGCG AGAAAGCCATTCGTTACGTGGGCGGCAAACACCTCATCCTGCGCACCAGCTGGGTGTATTCGCTGCATGGGCGCAACTTCCTGCTAACCATGCAACGGCT GTTGCAGGAAAAGCCCGAGCTGCGCGTGGTGGCCGATCAGATTGGCGCACCTACCTGGGCCGGTACCATCGCCGGCACCACCCAGGCGCTGGTCGAACAC TGGCTAAACGGCCAGGCCGGCCCGTGGGGCACCTTCCACCTGACCGCCAAGGGCGAGACCTCGTGGTTCGGTTTTGCCCAGGAAATCGGCAAGCACCTGC TGGCCCAGGACAAGCCGTGCGCGGTGCTGGAGCCCATTGCGTCCAGCGCCTACCCGACCCCGGCCGTACGCCCGCTGAACTCGCGCCTGGACTGCAGCCG CCTGGAACAGCAGTGGAACGTGCACTTGCCCAATTGGCGCGACGCGCTGATTGAGTGCCTGGCACCACTGGCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCATAATGCGCCGGACATTCTCCGGCGCATTTGCTTTCGACATGACTCCCTCGCTTCCCCGCCGCCCCCGCTGGCGCAGCCTAGCCTTGCTGGCCTTGT GCCTGGCGCCGCTGCTATGGCCGCTGCAGCACCTTGCCGAGCGCTACTACCGCAGTGAACTGGTGAGCCAGAACCGCCAGACGCTGGACCTGTACGTAGC CAACCTGCTGGGCACCCTGCACCGCTACGAGACGCTGCCGCAGATACTCGGTGACCTGCCCGCCCTGCGCGCCACCCTGGCATCGCCCGACCCGCAGACC GTGGACCACGCCAACCGCCTGCTCAAGAACATCAGCGAACAGACCGGTGCCGAGGTGATGTACCTGCTAGACCCCAGCGGCAATACCCTGGCCGCCTCCA ATTGGGAGAAAAAAGACAGCTTCGTGGGCCGCAACTTCGCCTTCCGCCCTTACTACAGCGATGCGATCGCCGGGCGCCTGGGGCGCTTTTTCGGCATGGG
Amino Acid Sequence
>dTDP-4-dehydrorhamnose reductase
MTQKILISGQFGQVSRELQQRLGHLGELHVLGRDKLDLAQPEGIREVVRTLRPTLIINAAAHTAVDQAETEEDLAFAINATAPRLFAEEAAALDIPLIHY STDYVFDGRKDGAYNEDDETNPLGVYGRSKLEGEKAIRYVGGKHLILRTSWVYSLHGRNFLLTMQRLLQEKPELRVVADQIGAPTWAGTIAGTTQALVEH WLNGQAGPWGTFHLTAKGETSWFGFAQEIGKHLLAQDKPCAVLEPIASSAYPTPAVRPLNSRLDCSRLEQQWNVHLPNWRDALIECLAPLA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site