Pseudomonas sp. M47T1, PMM47T1_20503
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. M47T1 contig021, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTTCTTGAACAGTGTGTCGATAACGAGGTTGTGGTCAGTCATCAGGTACGCAAATGGCTACGCGGCAAAAAGAATGGTCGCGATTGTCGCAGATTTGGGC TGCCAAGGGATATTGCATGGATGTGGTAGCTGGCTTGCCAGCGAGCTTCTCGCCCTCCCCAAACACTGGCTGGCAAGCCAGCTCTCACAATCGATGAATG TTTAGCGTAGCGCTTACCAAAGGTACGACAATCCTGATTTAACCGCCCCACGGCGCCATGCAACTATCCATGGCCATGATCCCTGTGACGCAACGTCCCG CCAGCATCGAACCCCGAGCCCCACGCCGGGCCGTGTGCCAGCGTCCGGGGGAAAACCCGCTGTTCAACATCATCCTGGCCTTCTGGGCCCTGTGGCACTG CCGCCACGCGCGCCCGCCAGACACCGCCCTCGCTGCCTGACCCAACCTTGTTCGCCGTCGTGAAGACGGACCGACCCCGTGTGCGCAAGCGAGAGCCCCC
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| DNA Sequence for Gene |
>PMM47T1_20503
ATGCATTTTGCCCCCCTGCAACAGGCCCAGGCCTTCCTGGACCAACACCCTCACATCGACATGTTCGAGCTGTTCATCCTCGACGCCAATGGCGTACCGC GCGGCAAACTGCTGCACCGCGATGAGCTGCTGGCCGTGTACCAAAGCGGCCGGCCGCTGCCCAGCACCATCCTGGGCCTGACCCTGAATGGCGATGACGT GGAAAACTCCGGCCTGGTGTGGGACGTGGGCGACATTGATTGCCGCGCCTACCCCCTGGAAGGCAGCCTGGTGCCCCTGCCCTGGCGCAAGATTCCCACT GCGGCGGTGCAGGTCAGCATGCACCCCAGCGAAGGTCTGCCCGCTACCGTCGCCGACCCGCGCCATGTGCTGGCACAGGTGATCGACGGGCTCAAGGCCG ACGGTTTTCACCCGGTGATGGCCTGCGAACTGGAGTTCTACCTGCTGGACGCCAGGCTTGATGCCAACGGCCACCCGCAACCGGCGCTGGACGCCGATGG CCGCCGCCCCCGCGCCACCCAGGTGTACGGTTTGCGCGAATTGGAGCAGATCGAGCCGTTTCTTGCCGACCTGTATGCCGCCTGCAAAGCACAACGCATC CCGGCGCGCACGGCGATTTCCGAATACGCCCCCGGCCAGGTGGAAATCACCCTGGAACACGGTGAGGCCCTGCTGGCCATGGACCAGGCGGTGCGCTACA AACGCATCGTCAAGGGTGTGGCGCACCAGCACGGCATGCAGGCCTGCTTCATGGCCAAGCCCTTCGACCACCTGGCCGGCACTGGCATGCACATGCACGT CAGCCTGGCCGATGACCAGGGCCGCAACCTCTATGCCAGCGAGGACAAGGCTGGCACCGCGCTGCTGCGCCACTCGGTGGGCGGCATGCTGGAGCACTTG CTGGACAGCCTGTTGCTGTTCTGCCCCAACGCCAACTCTTATCGACGCTTCCAGGCCAACAGTTATGCGCCACTGGCACCGACTTGGGGGGTCGACAACC GTACGGTCAGCCTGCGGGTACCGGGCGGCCCGGCCAATACCCGGCATATCGAGCATCGCATCTGTGGCGCCGACGCCAACCCTTACCTGGCGGCCGCGGC CATCCTTGCGGCAATTCATGACGGCATTCGCCAGCAGCGCGACCCGGGAGAGCCGGTGCAAGGCAACGGCTACGCCCAGGCCACAACCTTGCTGCCCACC GATTGGCTGACCTCGCTCACCGCGCTGGAGCGCTCCGACTGGGCCCGGGAAGCGCTGGGCCAGGGCTTCCTCAACGTGTACCTGGCCGTCAAGCGCGCCG AGTACCGGCAGTTCATGGCCCACGTGGGAGAGCAGGATTGGCGCTGGTACCTCACCAACGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATTCCACACACCGACCTGTAGGAGCGGGCTGCGCACGCGAAGGCAACACCGCGCTGGCCGGTTCGCGGACACAGTCGCGCCTACAAGGACACTGCAGCGC TCAAAGGTTTTATCCCATGAATCAACGCATCAATTCGTACTACACCGCCACCCTCAATCAGGACACTGACTTCCCGGTGCTGCAAGGCACCCACAGCGTC GACGTGGCCATCATCGGCGGCGGTTTCACCGGCGTCGCCACGGCCGTGGAACTGGCCGAGAAAGGCCTGAAAGTGGCGATACTGGATGCCCACAAGATCG GCTGGGGCGCCAGCGGGCGCAACGGCGGCCAGGTCACCGGCAGCCTGTCGGGCGATGCCGCCATGCGCAAGCAGATGCGCCGCACCCTGGGCGACGAGGT GGACGATTTCATCTGGCACCTGCGCTGGCGCGGCCACGACATCATCAAGCAGCGCGTGGAGAAATACGCCATCGACTGCGACCTCAAGCACGGCCACCTG
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| Amino Acid Sequence |
>glutamine synthetase
MHFAPLQQAQAFLDQHPHIDMFELFILDANGVPRGKLLHRDELLAVYQSGRPLPSTILGLTLNGDDVENSGLVWDVGDIDCRAYPLEGSLVPLPWRKIPT AAVQVSMHPSEGLPATVADPRHVLAQVIDGLKADGFHPVMACELEFYLLDARLDANGHPQPALDADGRRPRATQVYGLRELEQIEPFLADLYAACKAQRI PARTAISEYAPGQVEITLEHGEALLAMDQAVRYKRIVKGVAHQHGMQACFMAKPFDHLAGTGMHMHVSLADDQGRNLYASEDKAGTALLRHSVGGMLEHL LDSLLLFCPNANSYRRFQANSYAPLAPTWGVDNRTVSLRVPGGPANTRHIEHRICGADANPYLAAAAILAAIHDGIRQQRDPGEPVQGNGYAQATTLLPT DWLTSLTALERSDWAREALGQGFLNVYLAVKRAEYRQFMAHVGEQDWRWYLTNA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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