Pseudomonas sp. M47T1, PMM47T1_18795 (ligA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. M47T1
GCF_000263855.1|latest
Locus Tag
PMM47T1_18795
Name
ligA
Replicon contig018
Genomic location 66262 - 68622 (+ strand)

Cross-References

RefSeq WP_008371727.1
GI 495647148
INSDC EIK95030.1
NCBI Locus Tag PMM47T1_18795
UniParc UPI0002606C0A
UniProtKB Acc I4N0P0
UniProtKB ID I4N0P0_9PSED
UniRef100 UniRef100_I4N0P0
UniRef50 UniRef50_Q9KTD1
UniRef90 UniRef90_I4N0P0

Product

Feature Type CDS
Coding Frame 1
Product Name
NAD-dependent DNA ligase LigA
Synonyms
Evidence for Translation
Charge (pH 7) -16.83
Kyte-Doolittle Hydrophobicity Value -0.175
Molecular Weight (kDa) 86.1
Isoelectric Point (pI) 5.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003829 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMM47T1_18795
Search term: ligA

Human Homologs

References

No references are associated with this feature.