Pseudomonas sp. M47T1, PMM47T1_18140

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M47T1 contig017, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGCTGGAGCGCCTGCGCGCCATGGGCCTGAGAGTGGCGCTGGACACCAGCGGCGCCGCCCTGCGAGCTGGCCTGGCCACCCAGCCCTGGCTGATCAAAC CCAATACCGACGAGTTGAGCGAAGTGCTCGGCGAGCGCGTCGACACCCCCCAGCAGCAGGCCACCGTGGCCCGTCGCCTGCATGCCCAGGGCGTCGAGCA TGTGGTGATTTCCCAGGGCGCCCAGGGCGTTACCTGGTTCAGTGCCCAGGGTACCTTGCAAGCGCTGCCACCCACCGTGGACATCGCCAGCACCGTGGGC GCCGGTGATTCGCTGCTGGCCGGCATGGTCCACGGCCTGCTGACGGGCACCACGCCAGAACAGGCGTTGGCCACCGCCACGGCCATCGCCGCCATGGCGG TCAGCCAGATCGGTTTCGGTATCAGTGACCACGCCTTGCTGGCGCGGCTCGAAAGCGGCGTCTGCGTACGCACGCTGACAGAACAATAAGAGGGATTGCG
DNA Sequence for Gene
>PMM47T1_18140
ATGAAACTTGCCATTGTCACGGCCTGCCCCAACGGCCGCGTTTCCAGTGTGCTCAGTGCCCGCCTGCTTGATGCGGTAGCGCAGCGTCAGGGCTGGAGCA CCAGCGTTGAAGTGCACGACCCGCAACGTCCGGAAAACCGCCTGTCGCCAGCGGCCATCGAGGCGGCCGACTGGGTGCTGGTGGTGAACACCGGCCCCAT CGACCTCAGCCGCTTTGTGGGCAAGCGCCTGTTCCAGAGCACCCCGGCCGCCGCCCTGCAGGATGCCGAAGGCTTTCTGCGCCAGGCCGCCGAGCAAGCG CGTGTACATGAGCCTTCGCAGGCCACCACTGTGCCCGCGGCCGTTAGTGAGCGTGCCCCGCGCATCGTTGCCATCACCGCCTGCCCCACGGGCGTGGCGC ATACCTTTATGGCCGCTGAGGCCTTGCAGACCGCCGCCAAGCAAATGGGCTACGACCTGCAAGTTGAAACACAGGGCTCGGTAGGTGCGCGCAACCCGCT CAGCGCCCTGGCCATCCAGGACGCCGACGTGGTGTTGTTGGCGGCTGACATTGATGTGGCCACCGAGCGTTTCGCCGGCAAGCGCATCTACCGTTGCGGC ACCGGCATTGCCTTGAAACAAGCCAGGGCCACCCTCGACAAGGCGCTGGCCGAAGGCAAGCCTGAGGCGGCGGCCAACGCGGGCACAGCGCCGGCCAAAC AGGAAAAGACCGGCGCCTACAAACACCTGCTCACGGGCGTGTCGTACATGCTGCCGATGGTGGTGGCGGGCGGCTTGATGATTGCCCTGTCGTTCGTGTT CGGCATCACCGCGTTCAAGGAGCCCGGCACCCTGGCCGCTGCCCTGATGCAGATCGGTGGTGACAGCGCCTTCAAACTGATGGTGCCGCTGCTGGCCGGC TACATTGCCTATTCCATCGCCGACCGGCCGGGCCTGGCGCCGGGCATGATCGGCGGCCTGCTGGCCAGCACCCTGGGGGCGGGCTTCATTGGCGGCATTG TCGCAGGCTTCATTGCCGGCTACGCCGCCAAGTCCATCAACCGGTACGCGCGGCTGCCCACCAGCCTGGAAGCGCTGAAGCCGATCCTGATCATTCCGTT GTTCGCCAGCCTGTTCACGGGCCTGGTGATGATCTACGTGGTGGGCAAGCCGGTGGCCGGCATGCTCGAAGCCCTGACCCACTTCCTTGACAGCATGGGC ACCACCAACGCGATCCTGTTGGGTGTACTGCTGGGCGGCATGATGTGCGTGGACCTGGGCGGCCCGATCAACAAGGCCGCGTATGCGTTCTCGGTGGGCC TGCTGGCGTCACAAAGCTACGCGCCGATGGCGGCCACCATGGCGGCCGGCATGGTGCCGCCCATTGGCCTGGGCATCGCCACCTTCCTGGCTCGGCGCAA GTTCGCCCAAAGCGAGCGCGAAGCCGGCAAGGCCGCGCTGGTACTGGGCCTGTGCTTTATCTCTGAAGGCGCCATCCCGTTCGCCGCCAAGGACCCGCTG CGCGTGATCCCGGCCAGCATCGCCGGTGGTGCGCTGACCGGGGCGTTGTCCATGTACTTCGGTTGCAAGCTGATGGCGCCCCATGGGGGGCTGTTCGTGA TGCTGATCCCCAATGCCATCAACCATGCGTTGCTGTATTTGCTGGCGATTACCGCAGGTGCGGTGGTCACGGCAGTGGTGTATGCGGTGATCAAGAAGGC TGAAGTGGTGGAACTGACGGCCGAGCCGGCTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAAACCGAAACTAGCCGCGGCCGCCAGGCTGCGGCTTATTCAACGATGGCCTGCATTCGCGCCAAGGCGTCGTCAATGATCGCCTGCGGCACTTTTTCA ATTCGCCTTGCCCCACGTGCATCCAGGTCCAGCGTGCGGACCTGGTTCACCCGTATTGCCCCCTGTGTGCCGCAACCGCTGCCGGCCAGCGGTGGGGGAG CCTTCTGAAAACCGCGTAGGCAGATACTCGCAACGTTAGGCTTATGGCAACGCCGTCTCCTGCAAATACAGCCACAGCGTCGCCGCCTCGGTCACCCGCA GCACCGCCACGGATAACCGCGCCCCGCGCTGGCCGTTCAGGTGCTGGATCTCGGTATAGCGCAACGTCACGGTCTGCCCGTCCACGGCCACGGTGCGAAA GTCCTCCAGCACAATGTCCAGCCCTGCGCGTGCGCCGATATTGGCGTTGAAGAATACCTCGGTCTGGGGGCGTGTCAGTTCCATGCCCTTGGGCGTGACC
Amino Acid Sequence
>PTS fructose transporter subunit IIBC
MKLAIVTACPNGRVSSVLSARLLDAVAQRQGWSTSVEVHDPQRPENRLSPAAIEAADWVLVVNTGPIDLSRFVGKRLFQSTPAAALQDAEGFLRQAAEQA RVHEPSQATTVPAAVSERAPRIVAITACPTGVAHTFMAAEALQTAAKQMGYDLQVETQGSVGARNPLSALAIQDADVVLLAADIDVATERFAGKRIYRCG TGIALKQARATLDKALAEGKPEAAANAGTAPAKQEKTGAYKHLLTGVSYMLPMVVAGGLMIALSFVFGITAFKEPGTLAAALMQIGGDSAFKLMVPLLAG YIAYSIADRPGLAPGMIGGLLASTLGAGFIGGIVAGFIAGYAAKSINRYARLPTSLEALKPILIIPLFASLFTGLVMIYVVGKPVAGMLEALTHFLDSMG TTNAILLGVLLGGMMCVDLGGPINKAAYAFSVGLLASQSYAPMAATMAAGMVPPIGLGIATFLARRKFAQSEREAGKAALVLGLCFISEGAIPFAAKDPL RVIPASIAGGALTGALSMYFGCKLMAPHGGLFVMLIPNAINHALLYLLAITAGAVVTAVVYAVIKKAEVVELTAEPA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site