Pseudomonas sp. M47T1, PMM47T1_17595

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M47T1 contig016, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CATGCTGGTGTTCGGCAGCCCCGTGCACTGGGAAATGCCGGAACTGCGCGGTTTCAACTTCGTGGGCGGGTGGGTGATGATCCCAGAGCTGCTGGCCCTG ACCCTGGCCTTGAGCGTGTACACCGCAGCGTTCATCGCCGAGATCGTGCGTTCGGGCATCAAGTCGGTCAGCCACGGTCAGACCGAAGCGGCGCGCTCCC TGGGCCTGCGCCCCGGGCCAACGCTGCGCAAGGTGATCATTCCCCAGGCACTGCGGGTGATTATCCCGCCATTGACCAGCCAGTACCTGAACCTGGCGAA GAACTCTTCGCTGGCGGCCGGTATCGGTTACCCGGAAATGGTTTCGCTGTTCGCTGGCACGGTGCTCAACCAGACCGGCCAAGCCATCGAAGTCATCGCC ATTACCATGAGCGTGTACCTGGCGATCAGCATCAGCATCTCCTTGCTGATGAACTGGTACAACAAGCGCATCGCGCTGATCGAACGGTGAGGAAACGCCC
DNA Sequence for Gene
>PMM47T1_17595
ATGACGACGACGCATATTTTCAAACCGAACATGCCGCCGCCCAACATGGCGGTAGGCCCTGTCGCCTGGATGCGCGCCAACCTGTTTTCCACCTGGTTCA ACACCCTGTTGACGCTGGTGGCGTTGTACCTGATCTACCTGATCGTGCCACCGCTGCTGAGCTGGGCGTTCGTGGACGCGAACTGGACGGGTACCACCCG CGAAGACTGCACCAAGGCAGGGGCGTGCTGGGTGTTTATCGAGCAGCGCTTCGGCCAGTTCATGTACGGCTACTACCCGCAGGCACTGCGCTGGCGCGTC GACCTGACCGTGTGGCTGGCCGTGCTGGGTGCTGCGCCACTGTTTATCGCCCGCATGCCGCGCAAGCCGCTGTACGGCCTGTGCTACCTGGTGGCGTTCC CGATCATTGCCTACAGCCTGCTGCATGGCGGCTACCTGGGCCTTGAAAACGTGGCCACCAGCCAATGGGGCGGCCTGATGCTGACCCTGGTCATCGCCAC CGTGGGTATCGCCGGCGCCTTGCCGCTGGGCATCCTGCTGGCACTGGGGCGGCGTTCGAAAATGCCGGCCGTGAAGGTGGTATGCGTGACCTTCATCGAG TTCTGGCGCGGTGTGCCGCTGATTACCGTGCTGTTCATGTCTTCGGTGATGCTGCCGTTGTTCATGCCCGAAGGCATGAACTTCGACAAGCTGCTACGGG CCTTGATCGGCGTAATCTTGTTCCAGTCCGCCTACGTTGCCGAGGTGGTGCGTGGTGGCCTGCAGGCCATTCCCAAGGGCCAGTACGAAGCTGCCGCGGC CATGGGCCTGGGCTACTGGCGCGCCATGGGCCTGGTGATTCTGCCTCAGGCGCTGAAGCTGGTGATCCCGGGTATCGTCAACACCCTGATTGCACTGTTC AAGGACACCAGCCTTGTGATCATCATCGGCCTGTTCGACCTGCTCAACAGCGTCAAGCAAGCGGGCGCCGACCCCAAATGGCTGGGCATGGCCACCGAAG GCTATGTGTTTGCCGCTGCCGTCTATTGGATTTTCTGTTTCAGTATGTCCCGCTACTCCGTGCACCTGGAGCGCAAGCTGGACACTGGCCACAAGCGTTA G
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGTGTCATCATGAGCGAAGCAATCAAACAGCCTGTGGGCGCCGATGGCATTATCCAGATGCAGGGCGTGAACAAGTGGTACGGCCAGTTCCACGTACTG AAAGACATCAACCTGAACGTGAAACAGGGTGAACGTATCGTGCTGTGCGGGCCGTCGGGTTCGGGCAAGTCCACCACCATCCGCTGCCTCAATCGTCTGG AAGAGCACCAGCAGGGCCGTATCGTGGTGGATGGCGTGGAACTGACCAACGACCTCAAGCAGATCGAAGCCATCCGCCGCGAAGTGGGCATGGTGTTCCA GCATTTCAACCTGTTCCCGCACTTGACCATTCTGCAGAACTGCACCCTGGCACCGATGTGGGTGCGCAAGATGCCCAAGCGCAAGGCTGAGGAAATTGCC ATGCACTACCTGGAGCGCGTACGCATTCCAGAGCAGGCACACAAATTCCCCGGCCAGCTCTCGGGCGGCCAACAGCAGCGCGTGGCCATTGCCCGTGCCT
Amino Acid Sequence
>amino acid ABC transporter permease
MTTTHIFKPNMPPPNMAVGPVAWMRANLFSTWFNTLLTLVALYLIYLIVPPLLSWAFVDANWTGTTREDCTKAGACWVFIEQRFGQFMYGYYPQALRWRV DLTVWLAVLGAAPLFIARMPRKPLYGLCYLVAFPIIAYSLLHGGYLGLENVATSQWGGLMLTLVIATVGIAGALPLGILLALGRRSKMPAVKVVCVTFIE FWRGVPLITVLFMSSVMLPLFMPEGMNFDKLLRALIGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRAMGLVILPQALKLVIPGIVNTLIALF KDTSLVIIIGLFDLLNSVKQAGADPKWLGMATEGYVFAAAVYWIFCFSMSRYSVHLERKLDTGHKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site