Pseudomonas sp. M47T1, PMM47T1_14421

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M47T1 contig012, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGCGCCTGGACCGCCTGGACTCGGCGCGTATCGGCAGCTCGCGCGCCATTACCCAGCTGATCCTGCACCTGGTGGAAGGCACCCCGATCCGCCTGGTGG ACGGTGGCGAACAGAAGCGTACCTTCACCGACGTCGACGACGGCATCGAAGCACTGGCGCGCATCATCGAAAACCGCGACGGCAAGTGCGACGGCGAGAT CATCAACATTGGTAACCCGACTAACGAAGCCAGCATTCGCCAATTGGGCGAAGAGCTGCTGCGTCAGTTCGAAGCCCACCCACTGCGCGGCAACTTCCCT CCATTCGCAGGCTTCCGTGAAATCGAAAGCAAGGCGTTCTACGGCAATGGCTACCAGGACGTGACCCACCGCACCCCGAGCATCGAGAACGCCCGTCGCC TGATCGACTGGACCCCAACCATCGAGCTGAGCGAAACCATCGGCAAAACCTTGGACTTCTTCCTGCGCGAAGCCATGGTTGAAATCGAGAGCAAGCGTTA
DNA Sequence for Gene
>PMM47T1_14421
ATGCAGGCAGGTCTGCGCATCGACGTCGACACCTACCGAGGCACCCGTGAAGGGGTGCCGCGGTTGCTGGAACTGCTCGACGAAGCCAAGGTAAAAGCCA CGTTTTTCTTCAGCGTCGGGCCGGACAACATGGGGCGCCACTTGTGGCGCCTGATCCGCCCGCAATTCCTGTGGAAAATGCTGCGCTCCAATGCCGCCGG TCTCTACGGCTGGGATATCTTGCTGGCCGGCACCGCCTGGCCCGGCAAGCCCATCGGTCGAGACCTGGGGCACCTGATGCGCCAGGCCCGCGATGCCGGT CACGAAGTGGGGCTGCACGCCTGGGATCACCATGGCTGGCAGGCCAACGCCGGGACCTGGAGCGACGCGCAATTGCACGAGCAGATCCGCCAGGGCGTTG AAACCCTGAACGATATCCTCGGGCAGCGCATCGACTGCTCCGCCGCCGCCGGCTGGCGCGCCGACGAGCGCGTGGTGCAGGCCAAGGAAGACTTCGGCTT TCGCTACAACAGCGATTGCCGAGGTAGCCACCTGTTCCAACCGCGCCTGGCCGATGGCTCGCCGGGCACCGTGCAAGTGCCGGTGGACCTGCCCACCTTT GACGAGGTGGTGGGGCCGACGGTCAGTGCTGCCGGTTTCAATGATTTTATCCTGGACCGCTTCAAGCCTGGAGGCTTGAACAACTACACCATTCACGCCG AGGTTGAAGGGATTCTGATGGCTGACGATTTCCGCCGCTTGCTGGCAACGGCACGCGAGCGACAGATACAGTTCCAACCGCTGGGCAACCTGTTGCCCCA GGACACCGGCAGCCTGCCGGTGGAACAATTGACACGCGGCGTGCTGGAAGGCCGCGAGGGTTGGCTCGGGGTTCAACGACCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCAGCGCTGGACCCTGCCCGTCTTGCTGTTGGCATTCGGGCTTTTCTACCTGCTGCCCCTGCCCTTCCATGGCCTGTGGATTCCCGACGAAACCCGCTA CGCGCAAATGAGCCAGGAAATGCTGCTGACCGGCAAATGGGCCGCGCCGCATTTCATGGGTTTTCGCTATTTTGAAAAGCCGGCCGCCGGCTACTGGTTC ATCGCCATCGGCCAGTGGCTGTTCGGCCAGAACCTGTTCGGCGTGCGCGTGGCCTCAGCCTTGAGCCTGGGCCTGAGCGTGGTGCTGACCTATCTTGCGG CCAACCGCCTGTGGGGCGACAAGCGCAAGAGCCTGATCTGCGCCGTGCTGTACATGAGCTTCGGCCTGGTGGCCGGCCAGGCCGGCTATGCCAACCTGGA CCCGCAGTTTACCCTGTGGGTGAACCTGAGCCTGGTGGCGTTGTGGTTTGCGGTTGACAGCCACACCACGCGTGCACGCCTGGTCAACTGGGGGCTGCTG
Amino Acid Sequence
>4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
MQAGLRIDVDTYRGTREGVPRLLELLDEAKVKATFFFSVGPDNMGRHLWRLIRPQFLWKMLRSNAAGLYGWDILLAGTAWPGKPIGRDLGHLMRQARDAG HEVGLHAWDHHGWQANAGTWSDAQLHEQIRQGVETLNDILGQRIDCSAAAGWRADERVVQAKEDFGFRYNSDCRGSHLFQPRLADGSPGTVQVPVDLPTF DEVVGPTVSAAGFNDFILDRFKPGGLNNYTIHAEVEGILMADDFRRLLATARERQIQFQPLGNLLPQDTGSLPVEQLTRGVLEGREGWLGVQRP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site