Pseudomonas sp. M47T1, PMM47T1_13335

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M47T1 contig011, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAAGTCCTTGCCGGTGGCCATGATGGTCAAGGAAAGCGTCAACCGCGCGTTCGAAGTCAGCCTCAGCGAAGGCGTGCGCTTCGAGCGGCGCGTGTTCCAT GCCGCCTTCGCCACCGACGACCAGAAAGAAGGCATGGCGGCGTTCATCGCCAAGCGCGAGGCGCGCTTCAAGGGGCGGTAAATGATGCAGCACCGGCGCG GCCGCTACTGCGGGGCGCCCATGGTGCCTGTAGCAGCGGCGCAAGCCGCGCTACAGGCGCTGCGTGCTGACTGGCACACCGCATCGCAAGACGCAGCCGT CGGCAACTGCTACAGGATAGTTTCATGACAAACCTGAGTTTTTGTTAATTTGACGCCAGAATGATGGCATTTCAATATCGCGCCCTTTCGAAATGTAAGC AATTGTAAAAAATTGCGATACACCACCCAAGGACGCGATTGTGATCTGGTCAAGGACGCCTGCCGCCCGGCTTGTTCTGCTATTTACCCTGGCCGCCGCC
DNA Sequence for Gene
>PMM47T1_13335
ATGCCTCTGGCACAGGCTGCCGCCAGCCCCAGCCCCGGTGATCAGGACCTGATCCGCGACCGCCAGGACCGCCTGCTCGACGAGCAGCGCAAGCGCCTGG AAGACCTGCAGAACCTGCCCGCGCCCGCGCCAGCCCCCACGGCCCCGGCCGCGCCCACCAGCACCCGTTGTTTCCAGATCGATACCCTCGAGCTCAAGGG CGCCGACCACCTGCCCGACGGCCCGGCGCTGGTCAAACCCTACCTGCACCAATGCCTGGGCGTGGCGCAGCTCAATGAAGTGCTCAAGGTCATCACCGAC CGCTACATCGCCCTGGGCCTGGTCACCAGCCGTGCCTACCTGCCGCCCCAAGACCTGTCCAAAGGCCACTTGATCGTGCAGGTCATCGAAGGTCACCTGC AAAGCCTCAAGCCAGGGCAGGGCAGTGGCCTGACCCAGCGCGAACTGAACATGGGCTTTCCCGGCCACCCTGGTGAAGTGTTGAACCTGCGCCAAGTGGA ACAACTGGTCGACCAGCTCAACCGCCTGCCGTCCAACCAGGCGCAGATGGCCCTGGTGCCCGGCCAATCCGTGGGCAGCACCGACGTGCAGGTCAACAAC ACGCCGCACAAACCCTGGCGCGTGTCGGTGTCGCGCAGCAACGAAGGCCAGAAAAGCACCGGTCAGGGGCAATGGGGCTCGCGCCTGGACTGGGACAACC CCCTGGGCCTGGCCGACATGCTGAGCCTCAACGGCGGCCAGGACGCCCACCCGGACGATCCGCACAACAGCCACAACGCCGGCCTCACCTACAACCTGCC GTACGGCTGGTGGAACTTCACCTACAGCTACAACCAGAGCGACTACCGCTCCCTGGCCGAGGCCAACGGTTTCGATTTCAAGCAAAGCGGCGACAGCGCC ACCCACCAGTTCAAGGCCGAGCGGGTGATCTACCGCGACGCCCTCAGCAAGACCTCACTGAGCCTGGGCCTGTCCCACCTGGCCACCAACAACTACGTGG CCGGCAGCCGCCTGGACGGCAGCAGCAACCGCATCACCGAGCTGCACTACGGCTTTAACCACGGTCGACGCATCGGCGGCGCGTTCCTCAACCTGGACTT GGGCATGCAACAAGGCATCGGCGCCCTCGACGCCCAGGGCGACCACGACCCGGGCCCCGCCGACCCCACCGCGCGCTACCGCAAATACACCGCCACGGCC AGCTACCTGCAGCCGTTCAAGCTGTGGGGCGAGTCGTTCAGCTTCACCAGCCTGGCCACCGGGCAGCACAGCGAAGACGTGCTGTTCAGCGCCCAGCGCA TGAGCCTGGGCGGCGAGTCGTCGATTCGCGGCTACAAGGACGAAAACCTGAGCGGCGACAGCGGCGGCTACTGGCGCAACGACCTGCGCTGGAGCCGCCC CGTGGCCTGGGCGTGGCTGCAACCGGTGTTCAGCGAATACGGCAGCGACATCGGCTACGACCAGGGCGTGATCAGCGACACCCAGCACGCCGGCGACCAA CACGGCCGCGTGTCCAGCGACTCGCTGGAGCTGTTTGCCCGCGGCCAGCACCTGACCTTCAGCGTCACCCTGGCCCATTCCCTGGAGCGGCCGGCGGCGT TGGCCGACAGCGAAGCCCCGGTGTACTTGCGCCTCGAATTCCTTCTTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATACGCTTGCGAGACCCTGACATGGACGTACGCCATTTGGCCTTCCTGGCCCGCCAACCCTCGGCTGAAATTCAACCTCGCGAGCGCTTCTGGGGCATTT CCAAGCGCGGCCTGGCATTCATTCTCGCCAACGCCCTGTTCTGGCAACCGCTGTGGGCCCAGGCCGGCGGCATCACCGTCAGTGGCCAGGGCACCACCCT GGGCACCGCCGCCAACGGCGTGCCCATCGTCAACATTGCCGCGCCCAACGCCAGCGGCCTGTCGCACAACCAGTTCGGCGACTACAACGTCGGCAGCCAG GGCCTGATCCTCAACAACGCCACCGGCAGTACCCAGAGCACGCAGCTGGGCGGCATCATCCTGGGCAACAGCAACCTCAAGGGCCAGGCGGCCAGCACCA TCCTCAACGAGGTCACTGGCAACAACCGTAGCCAGCTCAACGGCTACACCGAGGTGGCCGGCCAGGCCGCCCACCTCATCGTCGCCAACCCCTACGGCAT
Amino Acid Sequence
>hemolysin activator protein
MPLAQAAASPSPGDQDLIRDRQDRLLDEQRKRLEDLQNLPAPAPAPTAPAAPTSTRCFQIDTLELKGADHLPDGPALVKPYLHQCLGVAQLNEVLKVITD RYIALGLVTSRAYLPPQDLSKGHLIVQVIEGHLQSLKPGQGSGLTQRELNMGFPGHPGEVLNLRQVEQLVDQLNRLPSNQAQMALVPGQSVGSTDVQVNN TPHKPWRVSVSRSNEGQKSTGQGQWGSRLDWDNPLGLADMLSLNGGQDAHPDDPHNSHNAGLTYNLPYGWWNFTYSYNQSDYRSLAEANGFDFKQSGDSA THQFKAERVIYRDALSKTSLSLGLSHLATNNYVAGSRLDGSSNRITELHYGFNHGRRIGGAFLNLDLGMQQGIGALDAQGDHDPGPADPTARYRKYTATA SYLQPFKLWGESFSFTSLATGQHSEDVLFSAQRMSLGGESSIRGYKDENLSGDSGGYWRNDLRWSRPVAWAWLQPVFSEYGSDIGYDQGVISDTQHAGDQ HGRVSSDSLELFARGQHLTFSVTLAHSLERPAALADSEAPVYLRLEFLL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site