Pseudomonas sp. M47T1, PMM47T1_11407

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00448	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	136	240	2.56E-6
PANTHER	PTHR45138	REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM	-	-	166	537	9.6E-86
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	251	362	2.6E-20
SMART	SM00448	REC_2	IPR001789	Signal transduction response regulator, receiver domain	249	362	1.5E-24
Gene3D	G3DSA:3.40.50.2300	-	-	-	113	241	1.1E-6
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	373	536	1.4E-44
FunFam	G3DSA:3.30.70.270:FF:000001	Diguanylate cyclase domain protein	-	-	371	536	1.2E-48
CDD	cd00156	REC	-	-	252	352	9.50851E-23
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	381	535	1.1E-45
FunFam	G3DSA:3.40.50.2300:FF:000346	Diguanylate cyclase response regulator	-	-	246	374	8.6E-55
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	378	534	1.75565E-57
Gene3D	G3DSA:3.40.50.2300	-	-	-	242	374	6.3E-26
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	375	538	1.6E-51
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	365	536	9.7E-51
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	378	532	9.4E-39
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	247	379	3.84E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.