Pseudomonas sp. M47T1, PMM47T1_09581

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M47T1 contig06, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGCCAGGTGGGCATCATGGCGCTTGCCAGGGTACACAGGGCGGCGGCGAACAAGGCGAAGACCATCACCGGCTTGCGGCCGATGGCGTCGCTGATGGGG CCGGTAATCAGCAGCCCGATGGCCAGCATGCCGGTGGACACCGACAGGATCAGGCTGCTCTGGGCGGCGTTGATGGCGAACTCCTTGGACAGGATCGGCA TCATCGGTTGTACGCAGTACAGCAACGCGAAGGTGGCGAATCCGCCGGAGAACAGCGCCAGCACGGTGCGCATGAACAGCGGCGTGCCTTTCTCGATGTA GGCTTCGCTCAGGTGCGAGGCAACGTCGGCAAGGGTGGTAGAGGGGATTTCCTGGTGCTGAGGTGCAGCGGCAGTTTTCACGCAAGGCCTCGGAAGGGCA ATTGAAAGAGTCAGTACAAAAAGCTTATAGCGGGCTAATCATTCTTTCCAATATATTGTTCGACCTGTTTGATAGCTTTAACGACCTAATCGAGGCCGCC
DNA Sequence for Gene
>PMM47T1_09581
ATGGAACTGCGACATTTGCGTTATTTCATTGCTGTGGCCGAAGAGCTGCATTTTGGCCGCGCCGCAGAGCTGCTGGGCATTTCCCAACCACCCTTGAGCC AGCAGATCCAGGCACTGGAACAAGAAGTGGGGGCTCGGTTGTTCGAGCGCACCAACCGTCGGGTGGCGCTGAGTGAGGCCGGGCGGCTGTTTCTGGAGGA AGCACGCCTGGTGTTGGCGCAAGTGGACAAGGCGGCGAATGTCGCCCGCCGCGCGCAGTTGGGTGAGCTGGGTGAAATGAAGATCGGCTTTACCTCGTCG GCGCCGTTCAATTGCGGTATTCCCAAGGCCATTTACGCGTTCCGCCAGGCCTTCCCGGCGGTGCACCTCAACCTTGAGGAAATGAGCAGCAAGGGCGTGG CCGACGCGCTGGTGGATGAAACCATCGAGGTGGGCCTGATTCGCCCGTTGCCGCTGCCCGACTCGCTGACGTGGGTGGAGCTGTTCAGCGAGCCGCTGGT GGCGGTGCTCAATGCTGACCATCCGCTGGCCCAGGGCAGCGACGCCGGGTTGTACATGCGTGAACTGGCCCAGGAACCCTTCGTGTTCTTCCCGCGCAGT TACGGCAGCGGCCTGTATGCCCAGTTGATCAGCCTGGCAACCCAGGCGGGGTTCAGCCCGCACTTCGCCCAGGAAGCCGGGGAGGCCATGACCATCATCG GCCTGGTGTCGGCCGGTCTGGGCGTTTCGGTATTGCCCGCCTCTTACCAGTCGATGCGCATCGACGGCGTGGTGTATCGCAAGCTGCTCGACCCGGAGGC CATCACCTCGGTATGGCTGGTGCAGCGCAAGGCTAACACCTCGGCCATGGCCAAGGCGTTCGTGGATATCGTCACGCGGCAGTCAAGTGTTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAATGGTCGAAACGGTACGTTCAAGTTGTAGTCCCCCAGGCCGATGACTACAGGGCGAGTTATCCCCCTGGAGCCCCCAATGAACGTTCGTCAGCTGCGC ATCTCGACCCGTGCTTTCCTCAGTTTTGGCCTGATCAGTCTGCTCATGCTCGGTTTCGGTATTTTCTCGATGAACCAGATCACGCACATGCGCGAGGCGG TCATCCATACCGAGGAAGTGTCACACGCCGGTACGCGCTGGCTGGGCAGCATCCGCGATAACTCGCTGGGCATTCGCGTACTCACCTTCCGTTTGATGCT CAATCGTGACCCGGCGCAAGTGCGCCCGGTGCTGGACCGCATGACCTTCCTGCGCGGCGAGCTCGACAAGGCCATCCAGGGTTATGCGCCGATCGTGCCT GAGGCTGCGCGCTCGCAATTCGCGCAGTTGCAAAGCGTGGTTTCCCGCTACCAGGAGCAATTGTCGCGCTACCAGGCGTTGTCTGACCAAGGTGACACCC
Amino Acid Sequence
>LysR family transcripitonal regulator
MELRHLRYFIAVAEELHFGRAAELLGISQPPLSQQIQALEQEVGARLFERTNRRVALSEAGRLFLEEARLVLAQVDKAANVARRAQLGELGEMKIGFTSS APFNCGIPKAIYAFRQAFPAVHLNLEEMSSKGVADALVDETIEVGLIRPLPLPDSLTWVELFSEPLVAVLNADHPLAQGSDAGLYMRELAQEPFVFFPRS YGSGLYAQLISLATQAGFSPHFAQEAGEAMTIIGLVSAGLGVSVLPASYQSMRIDGVVYRKLLDPEAITSVWLVQRKANTSAMAKAFVDIVTRQSSV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site