Pseudomonas sp. M47T1, PMM47T1_04789

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M47T1 contig03, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCCTCTTCGACGGCTTCCCGCGCACCATTCCCCAGGCTGAAGCCTTGGTGACTGCCGGCGTCGAGCTGGATCACGTGGTGGAAATCGCGGTCAAGGACG AAGAAATCGTCCAGCGTATCGCCGGCCGTCGTGTTCACGAAGGTTCGGGCCGCGTTTACCACGTTGTCTACAACCCGCCGAAAGTGGCTGGCAAGGACGA CGAAACCGGTGAGGAACTGGTTCAGCGCAAGGACGACACTGAAGAAACCGTGCGTCATCGCCTGTCGGTGTACCACGCCCAGACCGAGCCACTGGTAGCC TTCTACCAGAAGCTGTCGGCTGCCCAGGGCAAGCCGGTCTACAGCCATATCGAAGGCGTGGGGTCGGTTGACTCCATTACCGCCAAGGTACTGGCTGCAC TGAGCTGATCGTGTTCTGATCGAATGCTCGATCAATTGACGGCCCGCTTGCGGGCCGTTGACGTTTATAATACTGCACTTTTTTCTGATGGATTCGCGCA
DNA Sequence for Gene
>PMM47T1_04789
ATGACCACCTTGCTGGCCCTGGATACCGCTACCGAAGCTTGCTCCGTTGCCCTGCTGCATGACGGCAAGGTGCTGAGCCACTACGAAGTGATCCCGCGGC TGCACGCGCAAAAGCTGCTGCCCATGATCCAGACCCTGCTGGGCGAGGCGGGCATTGCCTTGTCGGCGGTCGACGCCATTGCCTTCGGCCGTGGCCCGGG CGCCTTCACCGGCGTACGCATCGCCATTGGTGTGGTCCAGGGCCTGGCCTTCGGCCTTGATCGCCCGGTGCTTGCGGTGTCCAACCTGGCCCTGCTGGCC CAGCGCGCGCTGCGCGAACAGGGCGCGCGCCAGGTGGCCGCCGCCATCGATGCGCGCATGGACGAGGTGTACTGGGGGTGCTACCAGGCCGACGGCAATG AAATGAAGCGGGTGGGGGCCGAAGCCGTACTGGCCCCCGAGGCCGTCAGCCTGCCCGCAGGCGCCACGGGCGACTGGTACGGCGCCGGCACCGGCTGGGG CTATGGCGAGCGGCTGGCGGTGAAACCGATTGCCTGCGACGCCACCTTGCTGCCTCATGCCCTGGACCTGCTGACCCTGGCTCAGGGCGCCTGGGCCCGT GGCGAAGCGGTGGCCGCCGACCTGGCCCAGCCAGTGTACCTGCGCGATAAAGTGGCCACGCCAAAAGCCCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGATGAATGGCGCCGCTAACTGCTCGTTTTTTGAGCAGTTCATCGGTTAAGTGGCCTGTGGGGTAAACCTTTTCCGGGAACTGTGGTCTAGTTATCACT CGGGCATTTGCTTACCTGCATAGGTGCCGCTAAATTGCCATCATCGGTCAAGAGTAAGCAGTTATGCGTGTAGACGGCTTTTCGTCGAGTTCCTACCCAA TCAAACGCAAGCCCCGCAAGGCGCAGGCGCAGGTAGACGACGCCGACGATCTGGAAGGCGACTTCGAAGTCCAGCCTTCCGCGCAACGCAGCGCGCCGCG CGGTGGTAGTGTTGCCAACCTGCCCGCACGCCCTCAGGACATGATCTTCCACCGGTCCATGAGCCGTCGCGTTGCCACCGCCCTCAGCAGCTACCTGACC ACCTCCACGTTCGTTGAATGGGACGGTGAAGTGTTGGGCCTGGACGTTCATATCTGACAGTGTCGCTGCTGCCGTACTACCTCGGTTGTCCTTCCTGGAG
Amino Acid Sequence
>O-sialoglycoprotein endopeptidase
MTTLLALDTATEACSVALLHDGKVLSHYEVIPRLHAQKLLPMIQTLLGEAGIALSAVDAIAFGRGPGAFTGVRIAIGVVQGLAFGLDRPVLAVSNLALLA QRALREQGARQVAAAIDARMDEVYWGCYQADGNEMKRVGAEAVLAPEAVSLPAGATGDWYGAGTGWGYGERLAVKPIACDATLLPHALDLLTLAQGAWAR GEAVAADLAQPVYLRDKVATPKAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site