Pseudomonas sp. M47T1, PMM47T1_04004

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M47T1 contig03, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCATTCTGGGCGTGCTGTACGAAAGCTTCGTGCACCCGCTGACCATCATCTCCACCTTGCCATCGGCTGGCCTGGGAGCGCTGATCATGTTGTGGATGTG TGGCCAGGACTTCTCGATCATGGCGTTGATCGGCCTGGTGTTGCTGATCGGCATCGTCAAGAAGAACGGCATCCTGATGGTCGACTTTGCCCTGGAAGCC CAGCGCCACGACGGGCTGTCGCCACGCGATGCCATCTTCAAGGCCTGCCTCACGCGCTTCCGCCCCATCATCATGACCACCCTGGCGGCATTGCTGGGCG CCCTGCCGCTGATGTTCGGCTTTGGCGCCGGCGCCGAGTTGCGCCAGCCGCTGGGCATGGCCGTGGTAGGCGGCCTGCTGGTAAGCCAGGCACTGACACT GTTCACCACCCCAGTCATATACTTGCAACTGGAGCGGCTGTTCCACCGGCGCCAGGCGGCACCCGCCCCGGCGCTGCCGGCCGGCCATTGAGAGCGGACC
DNA Sequence for Gene
>PMM47T1_04004
ATGCGTATCCTGATTATCGAAGACGAAGAAAAGACCGCCGACTACCTGTACCGGGGGCTTACCGAACAGGGCTTTACCGTCGACCTGGCCCCTGATGGCA TCGAGGGGCTGCACTTGGCACTGGAAAGCGACTACGCGGTGATCGTACTGGACGTGATGTTGCCCGGCCTGGATGGTTATGGCGTATTACGGGCGCTGCG CGCGCGCAAGCAGACACCGGTGATCATGCTCACCGCCCGCGAGCGCGTGGAAGACCGTATCCGCGGCCTGCGCGAAGGCGCCGACGACTACCTGGGCAAG CCCTTCTCGTTCCTGGAACTGGTGGCGCGGTTGCAGGCCCTGACCCGCCGCAGCGGTGGCCACGAGCCGGTGCAGATCAGCGTCGCCGACCTGTGGATCG ACCTCATCAGCCGCAAGGCCAGCCGCGCCGGCCAGCGCTTGGACCTGACCGCCAAGGAGTTCTCGCTGCTCAGCGTACTGGCACGCCGCCAGGGCGAGAT CCTGTCGAAGACCGCCATCGCCGAACTGGTGTGGGACATCAATTTCGACAGCGACGCCAATGTCGTCGAAGTGGCTATCAAGCGCCTGCGCGCCAAGCTG GACGGGCCGTTCGAGGAAAAACTACTGCACACCATCCGCGGCATGGGCTATGTGCTGGAGAGCCGGCGTGAGTACTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTCCATCGCGGTGCGCCTGAGCGCGCTGTTCACCCTGGTGGCCATGCTGATTTTCCTGATCATGGGCTGGGCGCTCTACCGGCAGGTGGACAAGAGCCTG GGGCTGTTGCCTGAAGCAGAGCTGGACGCCCGCTACAGCGTGCTGGAATCGGTGCTGACGCGCGATGGTTCACCCGAACGCTGGGCCAAGATCGTCGCCA AGCTCAAGCTGTTGGAAGAAGAAGATCGCCGCCTGCACTTCTGGGTGGTCAGCGACAACCCAGCCTTTGAATACGGCGCCCCCGATGAACAGGTGCGCCA GTTCGCCCAGGGCAAGCCAGGCAAGCGCGACCTGCAACGGGCCGAACATACCTACCCGCTCAAGGTGCTGGTCAACGCGCTGCCGGCCATCGACCAGCGC CCGCCGCTGCGTTTTCTGGCCGCCATCGAGACCGACACCTTTTCGCAAACCCAGCACACCCTGCTCATTGCCTTGATCAGCTTCGCCGCCCTGGGCGTTC
Amino Acid Sequence
>transcriptional regulator
MRILIIEDEEKTADYLYRGLTEQGFTVDLAPDGIEGLHLALESDYAVIVLDVMLPGLDGYGVLRALRARKQTPVIMLTARERVEDRIRGLREGADDYLGK PFSFLELVARLQALTRRSGGHEPVQISVADLWIDLISRKASRAGQRLDLTAKEFSLLSVLARRQGEILSKTAIAELVWDINFDSDANVVEVAIKRLRAKL DGPFEEKLLHTIRGMGYVLESRREY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site