Pseudomonas sp. M47T1, PMM47T1_03549

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M47T1 contig02, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAACGCCTCGGTGCCTGTGTTTTTTTATGTTAGGGTGCGCGCCCGCAAAAAACCGGACCGGCAAATTTTGCCCCGAGGAATGCCGGACAAATGGTCTCAG GCATGTGGGACCCGGCCTACATGGGCTGCACGGTTTCGCACACAAATTACCCACAAGTTATCCACAGAACACCGTGTTGCAATCCTCCCACAGGGGCCTT ATCTTGTATCTCCGGCGCGCCAAACCACTACATGTTGGGTTTTGGTGGATTTGCCAACCACATTTTTTACGCTAATCTCAAGCCCGTCTTGAGGTTATTT TTCACAGATTTACACTTTTTTTTTCGCTCTTTAACGCTCGCGAACGGAACCAGCACGACTTCACGTCGTAGGCTGGTGTTTTCCGTTTTCGAGCCGTAGC GCCCAGGGACGGTCAGTAAACCCGTCCCCGATCGTTGCAACGCTTTTCAAAGAACTACAGGTACCCCCAGGGCCTAACCCATTCGATCGTGGAGATACAG
DNA Sequence for Gene
>PMM47T1_03549
ATGCAGACCGACACAACTCGCGAGAACCCGGCAGGCAAGGCGCCACTGGCTACAGAATCCAGCCAGGATCTGAACGCCACCGCGCCGGGCCAGCTGCGCG TGATCAAGCGCAACGGGACTGTCGTCCCTTACACCGACGACAAGATCACCGTCGCCATCACCAAGGCTTTCCTCGCAGTTGAAGGCGGCACCGCTGCCGC TTCGTCGCGCATCCACGACACCGTGGCGCGCCTCACCGAACAAGTCACCGCTACCTTCAAGCGTCGCATGCCTTCGGGCGGCACCATCCACATCGAAGAA ATCCAGGACCAGGTAGAACTGGCCCTGATGCGTGCCGGCGAGCAGAAAGTGGCCCGCGACTACGTGATCTACCGTGACGCCCGTTCCAAGGAACGCGCCG TGCGCACCACCGCCGACACCCCGGTAGATGCCCACCCAAGCATCCGCATCAGCCTGGCCGACGGCAGCTTCGCGCCGCTGGACATGGGCCGCCTGAACAC CATCATCACCGAAGCCTGCGAAGGCCTGGCTGAAGTGGACGGCGACCTGATCCAGCGCGAAACCCTGAAAAACCTGTACGACGGCGTAGCGTTGAAAGAC GTCAACACCGCCCTGGTGATGACCGCCCGTACCCTGGTTGAGCGTGAGCCGAACTACTCGTTCGTCACCGCCCGCCTGCTGATGGACACCCTGCGCGCCG AAGGCCTGGGCTTCCTGGAAGTGGCCGACAGCGCCACTCACCACGAAATGGCCGACCTGTACGCCAAGGCCCTGCCGGCCTACGTGGCCAAAGGCATCCA GTACGAACTGCTGAACCCTGTGCTGGCCGAATACGACCTGGAAAAACTGGGCAAGGCCATCAACCACGAGCGTGACCAGCAGTTCACCTACCTGGGCCTG CAAACCCTGTACGACCGCTACTTCATCCACAAGGATGGCGTGCGTTTCGAACTGCCGCAGATCTTCTTCATGCGCGTGGCCATGGGCCTGGCCATCGAAG AGAAACAGCGCGAAGACCGTGCCATCGAGTTCTACAACCTGTTGTCGTCCTTCGACTACATGGCGTCGACCCCTACCCTGTTCAACGCCGGCACCCTGCG TCCACAACTGTCCAGCTGCTACCTGACCACCGTGCCGGATGACCTGTCGGGCATCTACCACGCCATCCACGACAACGCCATGCTGTCCAAATTCGCTGGC GGCCTGGGCAACGACTGGACGCCGGTCCGTGCGCTGGGTTCGTACATCAAGGGCACCAACGGCAAATCGCAAGGCGTCGTACCCTTCCTGAAAGTGGTCA ACGACACCGCCGTTGCAGTCAACCAGGGCGGCAAGCGCAAAGGCGCCGTGTGCGCCTACCTGGAAACCTGGCACCTGGACATCGAAGAGTTCATCGAACT GCGCAAGAACACCGGTGATGACCGTCGTCGTACCCACGACATGAACACCGCCAACTGGATCCCTGACCTGTTCATGAAGCGCGTCTTCGATGACGGCAAG TGGACCCTGTTCTCGCCAAACGAAGTACCAGACCTGCACGACCTGACCGGCAAGGCCTTCGAAGAGCGCTACGAGTACTACGAAGCCCTGACCGAGTACA ACAAGATCAAGGTATTCAAAACCATTCAGGCCAAAGACCTGTGGCGTAAAATGCTGTCGATGCTGTTCGAAACCGGCCACCCATGGTTGACCTTCAAAGA CCCGTGCAACCTGCGTTCGCCACAGCAGCACGTAGGCGTGGTGCACAGCTCCAACCTGTGCACCGAGATCACCTTGAACACCAACAAGGACGAGATCGCG GTCTGCAACCTGGGTTCCATCAACCTGCCGAACCACATCGTGGACGGCAAGCTGGACACCGCCAAGCTGGAGCGCACGGTCAACACCGCCGTACGCATGC TCGATAACGTTATCGACATCAACTACTACTCGGTACCACAGGCCAAGAACTCCAACTTCAAGCACCGCCCGGTGGGCCTGGGCATCATGGGCTTCCAGGA CGCGCTGTACCTGCAGCACATCGCCTACGGTTCCGACGCTGCCGTCGAGTTCGCCGACAAGTCCATGGAAGCGGTCAGCTACTTCGCCATCCAGGCTTCC TGTGACCTGGCCGACGAGCGCGGCGCCTACGAGACCTTCCAGGGTTCGCTGTGGTCCAAAGGCATCCTGCCGCTGGACTCGCAACAGATCCTGATCGAAG CCCGTGGCCAGAAGTACATCGACGTCGACCTGAACGAGTCCCTGGACTGGGCCCCGGTCCGTGCCCGCGTACAGAAAGGCATTCGTAACTCGAACATCAT GGCCATCGCACCGACCGCCACCATCGCCAACATCACGGGCGTGTCGCAGTCGATCGAACCGACCTACCAGAACCTGTACGTGAAATCGAACCTGTCGGGC GAATTCACCGTGATCAACCCCTATCTGGTTCGCGACCTCAAAGCCCGCGGCCTGTGGGACTCGGTCATGATCAACGACCTGAAGTACTACGACGGTTCGG TACAGCAGATCGAGCGCATCCCGCAAGAGCTCAAAGACCTCTACGCGACCGCCTTCGAAGTGGACACCAAGTGGATCGTCGACGCCGCCAGCCGTCGCCA GAAGTGGATAGACCAGGCTCAGTCGCTGAACCTGTACATCGCCGGCGCCTCGGGCAAGAAGCTGGACGTGACCTACCGCATGGCTTGGTACCGTGGCCTG AAAACCACCTACTACCTCCGTGCCCTGGCTGCCACCAGCACCGAGAAATCCACCATCAACACTGGCAAACTGAACGCCGTGTCGAGCGGTGGTGACAGCG CACCTGTCCAGGCAGCGGGCCCAGCACCAGTGCCAAAGGCTTGCGCGATTGACGAGCCGGATTGCGAAGCTTGCCAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCTTAGCTAGCAGCACAAAAAGGCCAACCTTCGGGTTGGCTTTTTTGTGCCCGGCAAACGCCACCTTCTGTACCCGCTACTGCCTTTTTTGTGGGAGCG GGCTCTGCCCGCGAAGTCACCGTCGAACGCCCCCCCCATGAAGCCGCCGTTACACCTTGCCAATCCGTCTCCGCTACAATATCCAAACCTACGATTCAGG AGGCGCCATGGAACCCCTGTCCTTTCAAGCCAAGAAAGCCTATTACGCCAAAGTCCGTCGATCCAACTACACCGCCAGCCTCCGTCTGGAGGGGTTTGAC GTAACCCGTGAGGATGCCGAGCGCCCACTGCCTAGCCGCGAATCCGTAATAAACCGCTACCGCAAGACAGCTGACTGATGGTCGACAAGTACGGCGTAGG GCAAGACCCGTACTGCTATCCAGGCACCACCATCCTGCGCAATAAGCTGAATATCCGCTGCGAGATAGAATTGGATCAGGCCGAGCGTGAGCTTTCCGAT
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit alpha
MQTDTTRENPAGKAPLATESSQDLNATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYRDARSKERAVRTTADTPVDAHPSIRISLADGSFAPLDMGRLNTIITEACEGLAEVDGDLIQRETLKNLYDGVALKD VNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLEVADSATHHEMADLYAKALPAYVAKGIQYELLNPVLAEYDLEKLGKAINHERDQQFTYLGL QTLYDRYFIHKDGVRFELPQIFFMRVAMGLAIEEKQREDRAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAG GLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGK WTLFSPNEVPDLHDLTGKAFEERYEYYEALTEYNKIKVFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIA VCNLGSINLPNHIVDGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGIMGFQDALYLQHIAYGSDAAVEFADKSMEAVSYFAIQAS CDLADERGAYETFQGSLWSKGILPLDSQQILIEARGQKYIDVDLNESLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSG EFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELKDLYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGL KTTYYLRALAATSTEKSTINTGKLNAVSSGGDSAPVQAAGPAPVPKACAIDEPDCEACQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site