Pseudomonas sp. M47T1, PMM47T1_03419

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00086	pac_2	IPR001610	PAC motif	374	415	3.1E-5
Pfam	PF05228	CHASE4 domain	IPR007892	CHASE4	58	215	7.0E-16
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	415	585	1.7E-54
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	427	580	2.0E-40
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	289	420	9.0E-17
Pfam	PF00563	EAL domain	IPR001633	EAL domain	602	832	9.4E-71
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	600	845	1.96E-87
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	291	413	5.06E-18
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	431	587	1.88E-43
CDD	cd00130	PAS	IPR000014	PAS domain	312	412	2.00654E-4
SMART	SM00091	pas_2	IPR000014	PAS domain	303	368	3.2E-4
NCBIfam	TIGR00229	JCVI: PAS domain S-box protein	IPR000014	PAS domain	299	419	1.7E-10
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	421	598	1.2E-52
FunFam	G3DSA:3.20.20.450:FF:000001	Cyclic di-GMP phosphodiesterase yahA	-	-	596	847	3.6E-89
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	427	583	8.84197E-56
SMART	SM00052	duf2_2	IPR001633	EAL domain	595	837	3.1E-112
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	422	584	2.3E-37
CDD	cd01948	EAL	IPR001633	EAL domain	601	834	2.47286E-102
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	599	853	3.1E-95
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	236	848	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.