Pseudomonas sp. M47T1, PMM47T1_02279

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M47T1 contig02, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGACGAATTGACCGCCAGCGGCATTCCCCACCAGTGGACCGTTGACATCCTCACACGGCTGTGGCGCAAGCTGGCACTCAACTGCGCCATCAACCCGCT GACCGTGTTGCATGACTGCCGTAATGGCGACCTGCAACAGCATCCGGCGCAAATCGCCACCCTGTGCGCCGAACTGGCCGAACTGCTGGAGCACTGTGGC CAGCCCGAGGCCGCTGTGGACCTGCACGGCGAAGTGCTGCGGGTGATTCAGGCGACGACGGCGAACTTCTCCTCCATGCACCAGGACGTCAGCCAGGGCC GGCGCACCGAGATCAGCTACCTGCTGGGCTATGCCTGCGCCGCGGCCGTGCGCCATCAGCGCAGCCTGCCGCACTTGAAACAACTGCATGCGCGCCTGGT CCAACATCTGCAGGCCGCCGGCCTGCCCAGCGTCTGAAGGCACCCCTGCGCTTTGATACACTCAAGGCTGAACGCCCTTTCCCGAAAGACGGACTCGTCG
DNA Sequence for Gene
>PMM47T1_02279
ATGCCATTGCGCCAGCGCCTTGAAAACCTGCCGGTGGGGCAGAAACTGCTCGCCGCCCTGCTGGTCCTGCTGACCACCGTGCTGTTGGTGGCCAACCTGA CCTTCATCAGCGCGGCCTACTGGATCTCCCAGGAAAGCATGGCCCCCCAGGCACTGCAGACCATCGGCAAGCTTGTCACCAACCCGGCCCTGGCCATCGA GGCGCTGGACTCGCCGCAAAGCGCCCAGGCCCTGCTGGAGGAGCTCAACAGCTATTCGCCCCTGCGCGCGGCAGCGGTGTACGACACCGACGGCAAATTG CTCGCACAACTGCAGCATGGCCAGCAACTCAAGGTGCCCGAGCATTACCGAAACATGGAAAAGTGGCGCCAGATCGAATTTCGCAGCACCCAGCTGGTGA ACCTGCCTCGCAGCGGCAAACCGCCTGGCCACCTGCTGCTGGTAGCCAGCAGCGAACTGCCCATGGCCTTCTACACCGGCACTCTCACCGCCAGCCTGGG CATTCTGGTGTTCAGCGTGCTGCTGTGGCTGGTGATCGCGCGCCAGATCAAGCGCCTGATCACCAAGCCCATCTACCAGTTGGAAGAACTGTCACGCCAG GTGACGCGCGAAGAGAACTACGCCCTGCGCGCCGCCCCTGGCAACCACGACGAAATCGGCAGCCTGGCCGAGGCCTTCAACACCATGCTGTCGCGCATCG AAGCCCGCGAGCAGCAACTCAAGCGTGCCCGCGACGACTCCCAGGCCGCCTATGACCAGGCCCAGGGCCTGGCGGAAGAAACCCGGCACACCAACCGCAA GTTGGAACTGGAAGTGCAGGTGCGCAGCAAGATCGAGAAAAAACTCACGGGGTTCCAGAACTACCTCAACAGCATCATCGACTCCATGCCCTCGGCACTC ATCGCCCTGGACGAGCAGTTGTACGTCACCCAGTGGAATCAGGAGGCCAGCGCGCTGTCTGGCACCCCGCTGGACGAGGCGCTGAACCAGCCGATTTTCC TCGCCTTCGAGCCACTGAAGCCGTTCCTGCCGGAGCTGAAGAACACCGTGGAACGCCACTCCGTGGCCAAGATCGAACGGGTCACCTGGGTCAAGGACGA CGTCACGCACCATTACGCCCTGACGTTCTACCCGCTGATGGGCGGCGCCGGGCGCGGCGTGGTGATCCGTATCGATGACATCAGCCAGCGCCTGTCCATG GAAGAAATGATGGTGCAATCGGAGAAAATGCTCTCGGTAGGCGGCCTGGCCGCAGGCATGGCCCACGAGATCAATAACCCGCTGGGCGCCATCCTGCACA ACGTGCAGAACGTGCGGCGGCGCCTGTCACCGGAGCTGGCACGCAACCTGGAAGCTGCCGCCGAAGCCGGCATCGACCTGGCCACGGTGAACCGCTACCT GCATAACCGCGAGATCCCGCAACTGCTGGACGGCATCCAGCAGGCCGGAGCCCGGGCGGCGAAGATCGTTACCCACATGCTCAGTTTCAGCCGCCGCAGC AATCGGCAACTGGCGCCGTGCGACCTGCCGGCGCTGATCGACCAGGCGGTGGAAATCGCCGGCAACGACTTCGACCTGGCCATCGGCTTCGACTTCAAGG GCCAGAATATCATCCGCCAGTTCGACCCCAACCTGGGGCCGGTGCCCGGCACGGCCAACGAGCTTGAACAAGTGTTGCTCAACCTGCTGAAGAACGCCGC CCAGGCCATTCACCAACGTCCGGAAGGCAGCGAAGCCGGCCGTATCACCCTGCGCACCCGGCTAAACCCGCCGTGGGCGGAAATACAGGTGGAAGACAAC GGCATCGGCATGCCCGAACAGGTGCGCAAGCGCACCTTCGAGCCCTTCTTCACCACCAAGGAGATTGGCCAGGGCACGGGGCTGGGGCTGTCGGTTTCCT ATTTCATCGTCACCAACAACCACAAGGGCCAGATGGAGGTACAGTCCACGCCCGGCCTGGGCACCTGTTTCACCTTGCGCCTGCCGCTTACAGCCAGTAC GGTGCCGGCCACCCTCTTGACCTCGGAGACATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACATGGGCTTTCGCTTGTCGAAGATCTACACCCGCACCGGCGACAAGGGCGAGACCGGCCTGGGCGACGGCCGCCGGGTTGGCAAGGACCACCCCCGAG TGGAAGCCATTGGCGAGGTGGACACGCTCAACAGCCAGCTAGGCCTGCTGCTGGCCGGCTGCGCCGAGGACTCACGCCTGAGCGAGGTGCTGGAAGCCTT GGCGCCGTGCCAGCATCGGTTGTTCGACCTGGGCGGCGAGTTGGCGATGCCGGCTTACCAGGCGCTGAACGCGGCTGAGGTAGAGCGCCTGGAACAGGTG ATCGACCTTTGGAATGAAGAGCTCGGCCCGCTGGAAAACTTCATCCTGCCGGGTGGGTCGGCGTTGATTGCCCAGGCCCACGTGTGTCGCAGCCTGGCAC GCACTGCCGAGCGCCGCTGCCAGCATTTGAATGCCGTGGAGCCGCTGGGCGGCGTGGGCTTGGCCTACATCAACCGGCTGTCGGACCTGCTGTTCGTGGC
Amino Acid Sequence
>sensor histidine kinase
MPLRQRLENLPVGQKLLAALLVLLTTVLLVANLTFISAAYWISQESMAPQALQTIGKLVTNPALAIEALDSPQSAQALLEELNSYSPLRAAAVYDTDGKL LAQLQHGQQLKVPEHYRNMEKWRQIEFRSTQLVNLPRSGKPPGHLLLVASSELPMAFYTGTLTASLGILVFSVLLWLVIARQIKRLITKPIYQLEELSRQ VTREENYALRAAPGNHDEIGSLAEAFNTMLSRIEAREQQLKRARDDSQAAYDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL IALDEQLYVTQWNQEASALSGTPLDEALNQPIFLAFEPLKPFLPELKNTVERHSVAKIERVTWVKDDVTHHYALTFYPLMGGAGRGVVIRIDDISQRLSM EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNVRRRLSPELARNLEAAAEAGIDLATVNRYLHNREIPQLLDGIQQAGARAAKIVTHMLSFSRRS NRQLAPCDLPALIDQAVEIAGNDFDLAIGFDFKGQNIIRQFDPNLGPVPGTANELEQVLLNLLKNAAQAIHQRPEGSEAGRITLRTRLNPPWAEIQVEDN GIGMPEQVRKRTFEPFFTTKEIGQGTGLGLSVSYFIVTNNHKGQMEVQSTPGLGTCFTLRLPLTASTVPATLLTSET
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site