Pseudomonas alcaliphila 34, D567_RS0123875

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas alcaliphila 34 c20, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACTGGCGAGAGCAGCCGAGTGCCGTGGACGACCGATGACCTGGCGCGCTTTACCCGTCTGGTCCAGGATTCGGTGGGCTTCGATGCCAGCCGCGGCGAC AGCGTCAGCGTGATCAATACGGCCTTTACCGCTTCGCTGGGTGAAGAGATCCCCGATATTCCGTTCTACACCCAGCCCTGGTTCTGGGACATCGTCAAGC AGGTGCTCGGCGTGCTGTTCATCCTGGTGCTGGTGTTCGGTGTGCTGCGCCCGGTGCTCAACAACATCACCGGCGGCGGCAGGGGCAAGGAGCTGGCAGG TTCCGGCGATGTGGAACTTGGCGAAATGGGAGGTCTGGACGGCGAGCTGTCCAACGATCGCGTCAGCCTCGGCGGGCCGCAGAGCATCATGTTGCCGAGC CCCAGCGAGGGGTATGATGCACAGCTGAACGCTATCAAGAGTCTGGTAGCGGAAGATCCTGGCCGCGTCGCCCAGGTCGTCAAAGAGTGGATCAACGCCG
DNA Sequence for Gene
>D567_RS0123875
ATGAGTGACAATCGTACCGCTACCAAGCTGAACAAGGTCGACAAGGCTGCGATTCTGCTGCTTTCGCTGGGTGAGACCGATGCTGCACAGGTGTTGCGTC ACCTCGGGCCGAAGGAAGTGCAGCGCGTCGGCGTGGCCATGGCCGGCATGCGCAATATCCACCGCGAGCAGGTCGAGCAGGTGATGGCCGAGTTCGTCGA CATCGTCGGCGACCAGACCAGCCTCGGTGTGGGTTCCGATGCCTACATCCGCAAGATGCTCACCTCAGCGTTGGGTGAGGACAAGGCCGGTAATCTGATC GACCGCATCCTGCTGGGCGGCAGCACCAGTGGCCTGGACAGCCTAAAATGGATGGAGCCGCGTGCCGTTGCCGATGTGATCCGCTACGAGCACCCGCAAA TCCAGGCCATCGTCGTCGCCTATCTCGATCCGGACCAGGCCGGTGAAGTGCTCAGCCATTTCGACCACAAGGTGCGCCTGGACATCATCCTGCGTGTGTC CTCGCTCAATACCGTGCAACCGTCCGCGCTCAAGGAACTCAACCAGATCCTCGAGAAGCAGTTCTCCGGCAGCGCCAACACCACGCGCGCCACCATGGGC GGCGTCAAGCGTGCGGCGGACATCATGAACTTCCTCGACAGCTCGGTGGAAGGTCAGCTGATGGACTCCATCCGCGAAGTGGACGAAGACCTGTCGACAC AGATCGAAGATCTGATGTTCGTCTTCGACAACCTGGCCGATGTCGACGACCGTGGCATCCAGGCGCTGATGCGCGAAGTCTCGTCCGAGGTGCTGGTACT GGCGCTCAAGGGGGCTGACGAGGCGATCAAGGACAAGGTCTTCAAGAACATGTCCAAACGTGCAGCTGAGCTGCTGCGCGACGACCTGGAGGCCAAGGGG CCGGTGCGCGTCAGCGACGTCGAAGGGGCGCAGAAGGAAATTCTCACCATCGCTCGGCGCATGGCCGAAGCCGGAGAGATCGTGCTTGGCGGCAAGGGTG GCGAGGAGATGGTTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCATGGCTGCCAAGGAGCCTGAGAGCGAGCTGATTCGCGCCAAGGATCTCGGCACGTTCGACCGCTGGGCGTTGCCCAGCTTCGATGCGCCGGGTGAAG AACCGGAAGAAGCCGAAGCTGCAGTTGATCAACAGGTGCAGCCTTCCGCTGAGATCGAGGCGCAGGAAACAGCGCAGGTCGAAGAGGTCGCACTCGAAGA TGTCAAACCGCTGACGCTCGATGAACTCGAAGCCATCCGCCAGGATGCCTACAACGAAGGCTTCGCCACGGGCGAGAAGGACGGCTTTCATGCCGGCCAG ATCAAGGCCAAGCAGGAGGCCGACGCGGCCTTGGCGCTGAAGGTCGGCAGCCTGGAAAAGCTCATGACGCAGTTGCTCGATCCGATTGCTGAGCAGGACC AGCAGATGGAAGTGGCTATGGTGCGTCTGGTCAGTCATATGGTGCGCGAGGTGATTCAGCGCGAACTGAGCACCGACTCCAGTCAGATTCGCCAGGTGTT
Amino Acid Sequence
>flagellar motor switch protein FliG
MSDNRTATKLNKVDKAAILLLSLGETDAAQVLRHLGPKEVQRVGVAMAGMRNIHREQVEQVMAEFVDIVGDQTSLGVGSDAYIRKMLTSALGEDKAGNLI DRILLGGSTSGLDSLKWMEPRAVADVIRYEHPQIQAIVVAYLDPDQAGEVLSHFDHKVRLDIILRVSSLNTVQPSALKELNQILEKQFSGSANTTRATMG GVKRAADIMNFLDSSVEGQLMDSIREVDEDLSTQIEDLMFVFDNLADVDDRGIQALMREVSSEVLVLALKGADEAIKDKVFKNMSKRAAELLRDDLEAKG PVRVSDVEGAQKEILTIARRMAEAGEIVLGGKGGEEMV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site