Strain | Pseudomonas alcaliphila 34 c20, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATTTCAGCGTGGACCTGGCGCGCAGCGCCGCCGCCGAAGTGCGCCCGCAGGCGCTACCTTATGTGGCCTACGTCAGCGCGGTGTACCGCCCGGACATTCT CAACGAGCTGTGCCAGTTCTTCATCGACCACCGCGTCGAGCTGGAAGCCCTGACCTGCGACACCTACCAGGCGCCACAGACCGGCGGCACCATGCTCAAC GCCACTCTGACCGTGACGCTGCCGGCCGGCACACAGATCAGTTGGCTGCGCGATCAGTTCCTCGATTTCGCCGATGCGCTGAATCTTGATGCCTTGATCG AACCCTGGCGCCCGCAGAATCCATGACGATCTGCTGCGCGTCGGCCCTGCTGCGTTAGAAACAGGTTCGGCCTGCTCATTTACAACTCGTAAAGTCGTAC GCGACCCCGGCCGGACCTCACCTGTTTCTGCGGGGCCGCCATCGGTATTGCAAGCTCTAGCTCGCGAGATCGCCGACAACCTCTAAATGAAGGAGTTTCC
|
|
DNA Sequence for Gene |
>D567_RS0123465
ATGCCCGTTGAACTCGACAAAGCCGTTGCCGACTTCCAGGCCGAGGCCACCAGTGGCCAGCAGGTAAAGCTGTCCGCCCTCAAGGGCCAGCAGGTCGTGC TGTATTTCTATCCGAAGGACGCGACCCCGGGCTGCACCACCGAGGGTATGGACTTCAGCGCTCGCTTCGAGCAGTTCAAGGCGGCCAACACGCTGATCTT CGGCGTGTCGATGGACAGCCTGAAGAAGCACGAAAGCTTCAAGTGCAAGCAGGCGTTCCCCTTCGAGCTGATCAGCGACGAAGAGCACCAGCTGTGCGAC CTGTTCGGCGTGTACCAGTTGAAGAAGAACTACGGCAAGGAATACATGGGCATCGTGCGCAGTACCTTCCTGATCGACAAGGACGGCGTGTTGCGTGAAG AGTGGCGCAACGTCAAGGTCGCCGGCCATGTCGACAAGGTACTGGCAGCAGCCGAAGCCCTGAACAAAGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCCCCTGCCCTGCAAATGAAACGCCGCGACGGCCAATGGCAGTCGCGGCGTTTTTTGTTCGGCGGTAGCCTGGTTTGAGCTGAGCAAACCCAAGCTACCA AGCATCGATGCAGCACATGTGTAGGAGCGGCGCCCCGCCGCGAACATGGGTGGCGCGCAATCGAAAAGCTTCGCCCCGGGGCGGGGCTCCTACGAAAGCC GCGCTGGAACCCAGGCACGGCCTTTGCCATCGACGCCTTATTCAGCGGACACCGGCTCGGTACGCGGCCAGGCGTTGATCACGGCCTTGAACAGGGTGGC CAGCGGAATGGCGAAGAATACGCCCCAGAAGCCCCACAGCCCGCCGAACAGCAGCACCGCGCAGATGATCGCCACCGGATGCAGGTTGACCGCCTCGGAG AACAGCAGCGGCACCAGCACGTTGCCATCGAGCGCCTGGATGATGCCGTAGACCACCATCAAATAGAGGAACTGATCGCTCCAGCCCCACTGGAACAGGC
|
|
Amino Acid Sequence |
>peroxiredoxin
MPVELDKAVADFQAEATSGQQVKLSALKGQQVVLYFYPKDATPGCTTEGMDFSARFEQFKAANTLIFGVSMDSLKKHESFKCKQAFPFELISDEEHQLCD LFGVYQLKKNYGKEYMGIVRSTFLIDKDGVLREEWRNVKVAGHVDKVLAAAEALNKG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|