Pseudomonas alcaliphila 34, D567_RS0121025
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas alcaliphila 34 III, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGCGTGAACCCGAGCAGTACAGCAAGAAATTCCGCTACAACCAGCGCCGTGAGCAGCGTTTGCTGGAAGAGGCGGGCGGGATTATCCGGCCGATGCTG GAGCTGACGCCGCAGGAACAGGCGCGCATCTACGCCGACCTGTTCCAGCGCCGTTGGGGCTTCGAGGCCACCGGCAAGGATCATCTGGCGGAGGTGTTCG GCCTGCTGCGCGAGTTCATGACCGGCTCGCTGATCTACCTCAACGACGAGCCGGTGGCGATCCAGGTGCTCTATCGCGTCGAGGCGCCGCAGTGGGTCAG CCTGGAGTACATCAACGGCGGCGTCGATCCGCAGCAGCGCGAGTTCAGCCCCGGTAGCGTGCTCAGTTTCGTCAACACGCAAAGCGAGTGGGAGCATGCG CGGGCGTTGGGCAAGCCATTGCGTTATTCGTTCGGTCGCGCCGACCGTGAATACAAGGATCGTTGGTGCAACCGGGTACCGGTCTATCAGGTGTGAACGC
|
|
| DNA Sequence for Gene |
>D567_RS0121025
ATGAACGGACGCAAGCAACAACTGCTCAAACGCCATCGGCGCCACAAGCGTCTTGCCTTGCTGCTGGGCTTGCTGGGACTGCTGATGTCGGGTGTGTTCG TCGCCTGGTGGCTGCCGCCAGTGTTGCTGGTGCTGGGGTGGGTGGCCCACGAGGCGTGGTTCGCCGATCATCTGTTCTATTCGCCGCGCGACGATTACCG CTACGACTTTCCCCAAGACTGTCTGAGCGTGCCTGCACGTATCGAGCAGGGTGGACTGCAGGTCGAGGCCGATGTTGCAGGCTACGACACCCTGGTACTC GAACTGCGGCTGAAGGCTACCTGGCTGGGGCGCTGGCTCGACCCCCATGTGCAACTTGGCAACGATCGCCAGGACTTCGAACGCGGTGTTTTAGGGCGCC GCTACCTCAACCTCTCCGGGCTGCAGGCGGACGGTTTGAGCGTCGTACCGCGCTTCTGCCGTATCGAGGGCGAGCTGCGTCTGCATGCCATGCGCAACCC CGACTTCGCCGCGCAGCGCCTGCTGATCATCGCACCGCATGCCGATGACGCTGAACTGGCTGCCTTTGGCCAATACAGCCGTGCAGCCGATGTCGCCATC GTCACCTTGACGCAAGGTGAGATCGAGGCAGAGTCCTACCAGCGGCTTGGTCTGGACGAGGCCGCGGCTGCTCGCCTCAAGGGCCGTCTGCGGGCCTGGG ACAGCCTGGCTGCGCCGCTCTGGGGCGGTGTCGCTCAAGAGCGCTGTGTGCAGCTCGGTTATTACTGTCTGCAACTGCCAGCCATGGCCGAACAACCGCA AATGCCGTTCGGCTCGCGTGAGTCGGGCGAGAGCGATGTGCGCAGCGTGCGCCAGCACAACCCGTTGACTCTGCCAGCCGACGCCGATGGTCAGCCGACC TGGGACAACCTGGTCGCCGACTTGGCTGCAGTGATCGAGCATTACCGTCCAGAAGTGCTGCTAACGCCGCACCCGGAACTCGACCCGCATCATGACCATG TCGCCAGTACACGCGCTGTACTCGAGGCCTGCGAACGTACGAGTTGGCAGCCGAAGACCCTGTTGCTCTACGCCAATCACTTGCATGACAACGATCGCTG GCCGATGGGCCCGGCAGGCAATGGCATTGCCCTGCCTCCAGCCATTACTGCACTGCCGGCCGAGCGTCTGTGGAGCCCCACGCTCGATGTCGAGCGGCAA CTGGACAAGGCCATGGCCCTGGGCCTGCAACACGACCTGCAAGGTTCGCTGCCGCTGAAAAAACGTCTGCGTCGGCTGATCCAGCACGTGCTGACTGGGC GCCGCTGGCCCGCCACCGGCGAAGATGAGTTCTTTCGCAAGGCCGTGCGCCGCCATGAGTTGTTCTGGGTGCGCCTGCGTTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTGGGGTGCTGGATGCACCGTGCTATGATTTTTCCCGTTTTTCTCCCCTTCTGGAGCTGCCATGAAACTGACCATGCCCCGCTATGACCAAGCCGCCGTT CTGGTGGTAGGCGACGTGATGCTCGATCGCTATTGGCATGGCGGCACTTCGCGGATTTCTCCGGAGGCGCCGGTACCGGTGGTGCGTGTCGAGCAGATCG AGGATCGTCCCGGCGGCGCTGCCAACGTGGCCCTGAATATCGCCGCACTCGGTGCGCGCGCCTTGCTGGTTGGCGTGACCGGTAATGATGAGGCCGCCGA AAGCTTGAGCGATAGTCTCCGTGGCGCGGGTGTGGATGCACATTTCCAGCGTCATGACGATCAGCCGACCATCGTCAAGCTGCGGGTGATGAGCCGTCAC CAGCAACTGCTGCGCATGGACTTCGAGGAGCCGTTCAACACCGACACCGTCGCCCTGGCCCGTGAGGTCGATACGTTGCTCGATGGGATCAAGGTGCTTG
|
|
| Amino Acid Sequence |
>GlcNAc-PI de-N-acetylase
MNGRKQQLLKRHRRHKRLALLLGLLGLLMSGVFVAWWLPPVLLVLGWVAHEAWFADHLFYSPRDDYRYDFPQDCLSVPARIEQGGLQVEADVAGYDTLVL ELRLKATWLGRWLDPHVQLGNDRQDFERGVLGRRYLNLSGLQADGLSVVPRFCRIEGELRLHAMRNPDFAAQRLLIIAPHADDAELAAFGQYSRAADVAI VTLTQGEIEAESYQRLGLDEAAAARLKGRLRAWDSLAAPLWGGVAQERCVQLGYYCLQLPAMAEQPQMPFGSRESGESDVRSVRQHNPLTLPADADGQPT WDNLVADLAAVIEHYRPEVLLTPHPELDPHHDHVASTRAVLEACERTSWQPKTLLLYANHLHDNDRWPMGPAGNGIALPPAITALPAERLWSPTLDVERQ LDKAMALGLQHDLQGSLPLKKRLRRLIQHVLTGRRWPATGEDEFFRKAVRRHELFWVRLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|