Pseudomonas alcaliphila 34, D567_RS0119530

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas alcaliphila 34 III, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAACACACCCTTGCCGGCCTGTACGCTGACCAGGCCCAACGCGCTGAGCGACGACAGCGCCTCACGCAGTGACGCACGGCTGACACCAAGGCGCTCGGCC AGATCGCGCTGCGACGGCAGCGCGTCGCCGGGGCGATAGCCCTCGTCCTCGATCAGGCGGCGGATCGCCTGCAAGGCGTATTCGGGTACCGCGCGGGGAG CAGAAGCATTCATGACTGTTCGGGCCGGTCAGTCCAGTGAAGTCGCCTTTGTACGGCCATAAGGCCGCCCCAGGCAAGCGACGCCCTCTTGTGGAACAGC CTGTCACGCGGATGCACCGAGATAGCTCAGAAACGCTTCTGACCAACTGGTCAGCTACGCCAACTGTTCAGACCAGTAAGACCTTGTTTCCACTCACCCG AAACGATGAAAGCCCTTATTTCATTGAACTTGGCACAGGCGATGCACTGCATGAGCCAGGCAAAACGCTTCAGTTTTCGTTCATTCATCGGGAGTTCGAC
DNA Sequence for Gene
>D567_RS0119530
ATGCGTAAACTTCACCGCACCCTGCTGGGTACCCTGTTCGCTGCACTGGCCTTTGGCGCTGCCACCGCGCATGCCGATGCCCTTGAAGACATCAGCAAGG CCGGTGTGCTGAAGGTCGCCGTGCCGCAGGATTTCCCGCCGTTCGGCTCGGTCGGCCCGGACATGAAACCGCGCGGCCTGGATATCGACACCGCGCAACT GCTGGCCGACAAGCTGGCGGTAAAGCTGGAGCTGACCCCGGTCAACAGCACCAACCGCATTCCCTTCCTCACCACCGGCAAGGTCGATCTGGTGATCTCC AGCCTCGGCAAGAACCCCGAGCGTGAAGCGGTGATCGACTTCTCCGCCGCCTACGCGCCCTTCTACCTCGGCGTGTTCGGCCCGGAGGACGCCGCCATCG CCAGCCTCGACGACCTGAGCGGCAAGACCATCAGCGTCACCCGTGGCTCCATCGAGGACATCGAGCTGAGCAACGTCGCTCCGAAAGGCGCCACCATCAA GCGCTTCGAGGACAACAACTCGACCATCGCCGCCTACCTCTCCGGCCAGGTCGAGCTGATCGCCAGCGGCAACGTGGTGATGGTGGCCATCTCCGAGCGC AACCCCAAGCGCGTACCGAGCATGAAGCTCAAGCTCAAGGATTCGCCGGTGTACGTCGGCGTGAACAAGAACCAGAGCGCGCTGCTGGACAAGGTCAACA CCATCATCGCCGACGCCAAGGCCGACGGCAGCCTCGAGTCGCTCAGCCAGAAGTGGCTGAAGCAGCCGCTGCCGGCCGGCCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCACGCGGAGAGCTGAACCATGGCGTACCAGTTCGACTTCGCCGCCGTCCTGCAGCACAGCGATCTGCTGCTGCAGGGCGCGGCCTTCACCCTCGGCCT GACGGCGATCGGCACCCTGCTGGGCGTCGGTCTCGGCATCGTCGGGGCGATACTGCGCGCCTGGCGCATCCGCCCGTTCGACCGGATATTCGGCATCTAC GTGGAGCTGATCCGCAATACGCCTTTCATCGTTCAGCTGTTCTTCATCTTCTTCGGCCTGCCCTCGCTCGGCGTGCGCCTGAGCGAGTGGGAAGCCGCGG TGCTGGCCATGGTGATCAACCTCGGCGCCTACTCCACGGAAATCATCCGTGCCGGCATCCAGGCCATCCCACATGGCCAGCTCGAGGCCGCCAGCGCACT GGCCATGAGCCGCTTCGAAACCTTCCGCCATGTGGTGCTGCGCCCGGCACTGGGCAAGGTGTGGCCGGCGCTGTCGAGCCAGATAATCATCGTCATGCTC
Amino Acid Sequence
>amino acid ABC transporter substrate-binding protein
MRKLHRTLLGTLFAALAFGAATAHADALEDISKAGVLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADKLAVKLELTPVNSTNRIPFLTTGKVDLVIS SLGKNPEREAVIDFSAAYAPFYLGVFGPEDAAIASLDDLSGKTISVTRGSIEDIELSNVAPKGATIKRFEDNNSTIAAYLSGQVELIASGNVVMVAISER NPKRVPSMKLKLKDSPVYVGVNKNQSALLDKVNTIIADAKADGSLESLSQKWLKQPLPAGL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site