Pseudomonas alcaliphila 34, D567_RS0119115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas alcaliphila 34 III, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACCATTCTGCTCGACGTGCCGAAAACCGCTGCTGTGGCCAAGGAAGAGACCTTCGGCCCGCTGGCGCCGCTGTTCCGCTTCAAGGACGAGGCCGAAGTG ATCGCCATGGCCAACGATACCGAGTTCGGCCTGGCGTCCTACTTCTATGCCCGTGATCTGGGCCGCGTGTTCCGCGTGGCCGAGGCGCTGGAGTACGGCA TGGTGGGTATCAACACCGGCCTGATCTCCAACGAAGTCGCGCCGTTCGGCGGCGTGAAAGCGTCCGGCCTGGGCCGCGAAGGGTCCAAGTACGGGATCGA GGACTACCTCGAGATCAAGTACATGTGCCTGGGCGGCATCTGATTCGGAAATCTGCTGGTTTCCAAGACGGGGCAAGGTGCGAAAGAGCGTGCGGCGCCC CGGTTGTAAGTCGTAACCCTATTGAGTCCCTCGCGGGCTCGGTTCAGTCGATCATCGCATGCTGAACCGACCTCCCGCCGGGGACGACCATGAGGACACC
DNA Sequence for Gene
>D567_RS0119115
ATGAGCAAGACCAACGAATCCCTGCTGCAACGCCGTGCCGCCGCCGTACCGCGCGGTGTCGGCCAGATCCACCCGATCGTCGCCGAGCGCGCCGAGAACG CCACCGTATGGGACGTCGAAGGCCGCGAGTACATCGACTTCGCCGGCGGTATCGCCGTGCTGAACACCGGCCACCTGCATCCGAAGGTGATCGCTGCCGT TCAGGAGCAACTGACCAAGCTGACCCACACCTGCTTCCAGGTGCTGGCCTACGAGCCCTACATCGAGCTGTGCGAAGAGATCGCCAAGCGCGTGCCGGGC AACTTCGCCAAGAAGACCCTGCTGGTCACCTCCGGCTCCGAAGCCGTGGAAAACGCCGTTAAGATCGCCCGTGCTGCCACCGGCCGCGCTGGCGTGATCG CCTTCACCGGCGCCTACCACGGCCGTACCATGATGACCCTGTCGCTGACCGGCAAGGTGGTGCCGTACTCCGCCGGCATGGGTCTGATGCCTGCTGGTGT GTACCGCGCCCAGGCGCCGTGCCCGCTGCATGGTGTGAGCGAGGACGAGTCCATCGCCAGCATCGAGCGCATCTTCAAGAACGACGCGCAGCCGCAGGAC ATTGCCGCGATCATCATCGAGCCGGTGCAGGGCGAAGGTGGTTTCTACGTCAACTCCCCGGCCTTCATGCAGCGCCTGCGCGCTCTGTGCGACCGGCACG GCATCCTCCTGATCGCTGACGAAGTGCAGACCGGCGCCGGCCGTACCGGTACCTTCTTCGCCACCGAGCAACTGGGCGTGGTGCCGGATCTGACCACCTT CGCCAAGTCCGTTGGTGGCGGCTTCCCGATTTCCGGCGTGTGCGGCAAGGCCGAGATCATGGACACCATTGCCCCCGGTGGCCTGGGTGGCACCTATGCC GGTAGTCCGATTGCCTGCGCCGCGGCCCTGGCCGTGCTCAAGGTGTTCGATGAAGAGAAGCTGCTGGAGCGTTCCAAAGCCGTGGGCGAGAAGCTCAAGG CGGGCCTGAAGACCATCGCCGAGAAGCACAAGGTGATCGGTGACGTGCGTGGCCTGGGCTCGATGGTCGCCATCGAGCTGTTCGAAGGCGGCGACCACAG CAAGCCAGCTGCCGAGCTGGTTGGCAAGATCGTCGCCCGTGCGCGCGACAAGGGCCTGATCCTGCTGTCGTGCGGTACCTACTACAACGTCATCCGTTTC CTGATGCCCGTCACCATTCCTGACGCGCAACTGGAAAAAGGCATCGCCATCGTCGCCGAGTGCTTCGACGAACTGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGGAAGCTGGGCACGCGCCTGCGTGCTCATGAAGAGACCCGCCTTGTGCGGGTCTTTTTTTGCCTGAAATTGGCTATTCGGTTGACGGGGTAAAATGA TCGTTTTACCTTGGTCTTCATGAATATAGACACGAAGCTCATATCTGCAGCCGAAAATCTGTTCGACCGTCACGGCTTCAACGCAACCGGCATGGATCGC CTGGCCCAGGCCGCCGGCATGTCCAGCCGGACGTTGTACAAGCACGCCGGCAGCAAGAATGAACTCATCGCGGCGGTGCTGATGACCCGTGGCCAGCGCT TCCTGCAACGTCTTGAGGTAGACAGCGTCGAGGCGCTGTTCGATGCATTGGCAGGCTGGATGGGTGAAGAGGGGGCGCGTGGATGCCTGTTCCTGCGCGC GCAAGGTGAGATCGGCAGCGCCGTGCCGGAAATCACCGAAGCGGTCGCCGCGTACAAGGCACGCTTCAGTGAAACGGTTGGGCAGATCCTCGCCCGGCAA
Amino Acid Sequence
>4-aminobutyrate aminotransferase
MSKTNESLLQRRAAAVPRGVGQIHPIVAERAENATVWDVEGREYIDFAGGIAVLNTGHLHPKVIAAVQEQLTKLTHTCFQVLAYEPYIELCEEIAKRVPG NFAKKTLLVTSGSEAVENAVKIARAATGRAGVIAFTGAYHGRTMMTLSLTGKVVPYSAGMGLMPAGVYRAQAPCPLHGVSEDESIASIERIFKNDAQPQD IAAIIIEPVQGEGGFYVNSPAFMQRLRALCDRHGILLIADEVQTGAGRTGTFFATEQLGVVPDLTTFAKSVGGGFPISGVCGKAEIMDTIAPGGLGGTYA GSPIACAAALAVLKVFDEEKLLERSKAVGEKLKAGLKTIAEKHKVIGDVRGLGSMVAIELFEGGDHSKPAAELVGKIVARARDKGLILLSCGTYYNVIRF LMPVTIPDAQLEKGIAIVAECFDELA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site