Pseudomonas alcaliphila 34, D567_RS0118760
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas alcaliphila 34 IIC, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAAACGGTATCGGCCCAGAGCGGGGCTGCCAGGGTAAAAAGGAATAAGGCGATCAGTACGCGCATGATAAGGACGAACCCTATGGGCAAGACGAAACCG CCAGAGTCTGCATGGCAGGCCCCACCACCGGCAAGCGTCGAGGCGCGTCGCGAAGCGCTGTACCTGGTATTGGCACAGGTGCCGGAAGGCAGGGTCGTCA GCTATGGCGAACTGGCCCAGTTGGCTGGTCTTGGCCGCGCTGCACGCTGGGTTGGTCGTACGCTGAGCCAATTACCGAACGGCACCACGCTGCCCTGGCA TCGGGTGATTGCCGCTGGCGGACGCCTCAGTCTGGCTGCCGGCAGTCCTTCCGGGGCCGAACAACGGGCGCGCCTGCGTGCAGAGGGCATCAGCATCCTG AACGAACGTGTGGATATGCGCCGTCACGGCTGGCGTCCGATGGAGCACAGCAGTTAGAGTGCGCCCTACCAAGACTCCCCCCTGCCCAGATTCGAGCCTG
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| DNA Sequence for Gene |
>D567_RS0118760
ATGCCACGCAAATCCTGGCGAGAAGCCCTCGCGACCTACGCCAACCCCGCCACACTGGCACTGCTGCTTCTGGGCTTCGCCGCCGGCCTGCCCTACATGC TGGTGTTCTCGACCCTGTCGGTATGGCTGCGCGAAGCCGGTGTGGCGCGCGAGACCATCGGTTTCGCCAGCCTCATCGGCTTGGCCTACGCCTTCAAATG GGTGTGGGCGCCCATGCTCGACCAGTGGCGCCTGCCATTATTGGGCAAGCTTGGCCGGCGCCGCTCCTGGCTGGTGCTGTCGCAAGGGCTGGTAGCCATC GGCCTGATCGGCATGGCCAATTACGACCCGCAAACGCACCTGTCCTCGCTGATCGCCCTCGCCGTACTGGTGGCCTTCGCCTCGGCCACTCAGGACATCG CCGTCGACGCCTACCGCCTGGAAATTCTCGGCGACGAGCATCAGGCCGCGCTGGCTGCCGCCTACATGACCGGCTATCGGGTGGCCGCGCTGCTGGCCAC CGCCGGTGCGCTGTATTTCGCCGAAGGCTTCGGCTCGACCGCCAAGGACTACCAGTTCAGCGCCTGGACCGGTACCTATATGCTTTTCGCCCTGCTGATG CTGCCAGGCCTGCTCACCTCCATCTGGATGCGCGAGCCGCCAGCACCGCCGCACATCCATGTTGCGCCGCCTAAGCACGGATTTTTCCACCAGTTGCTGG CGATCAGCGCGGTCATCATGCTGATCATCGCCGTGCCGACCATGTTCATCCAGTTCTACCAGAGTGATCTGGTGCCGATGCTGCTCGGCGACGTCAGCAT GCAGGAGCTGCTCTACAACGACCGCGCCTTCCTGCGTGCGCTGCTCTACAGCACCCTGGCCTGCGTGTGCGCCTCCGGGCTGTTCTGGGGTGGGCTGGCG CCGGTGCTGAAAACGGCAGCGGCAAGGTATGGATTCTTCCATCAGCTGCTGTCCGTGCTGCTGCTGATCATCCTGCTGATTGCCGTTCCGGCGATGATCA CCCAGTTCTACGAAAGCGATCTGCACCTGGTCTTGCAGGGCCAGATGAGCCTGCAGGAACTGCTCTACCAAGACCGCGCCTTCCTCCGCGCCCTGCTCTA CACGCTGCTCACCAGCCTGTCGATTTCCAGCCTGTTCTGGGGCGGCATGGCCCCGGTGCTGACGCCGATCAACGACTTCATCGTGCGCTATCGCTGGCAG GCGCTGCTCTTGCTGAGCCTGATTGCCACCTATCGCCTGTCCGACACCGTAATGGGGGTGATGGCCAACGTCTTCTATATCGACCAGGGCTTCACCAAGG AGCAGATCGCCAGTGTCAGCAAGATTTTCGGCCTGGTGATGACCCTGCTCGGCGCCGGGGCCGGCGGCCTGCTCATCGTGCGTTTCGGCATCATGCCGAT TCTCTTGATCGGCGCGGCCGCCTCGGCGGCCACCAACCTGATGTTCATGCTGCTGGTAGGCATGGGCCCGCACCTGAACATGCTGGTCGTCACCATCAGT TGCGACAACTTCAGCGCCGGCCTGGCCACCTCGGCGTTCGTCGCCTACCTGTCGAGCCTGACCAATCTGAAGTTCTCGGCCACCCAGTACGCCCTGCTCA GTTCCATCATGCTGCTGCTGCCGCGCCTGATCGGTGGTTATTCCGGCGTGATGGTGGAAAGCCTCGGCTACGCCCACTTCTTCCTCGCCACGGCGCTGAT GGGGATACCGACACTGCTGCTTATCATCATTCAGTGGCGCCGCGACAAACGCCAAGCGCGGCCTGAGACGACACCGCCTGCTGTCGAGCAAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CACCAGGCAGAAAAAAGCCCCGGATCGACCGTAATGCTGTTCACTTAAGAAACGGTCGAGCTCGATCAGTCCCCTCGCCCCTCCGGGGAGAGGGTTAGGG CGGGCCGCGTTCGGAGAGGGGGAAACTGGCAGTTTTGCGGTGTTTTCTGCCCTCTCCCCCAGCCCCTCTCCCATAAATGGGAGAGGGGAGCCAAACGTGT GCAACCTTAAGTGAACAGCATTACGCACTTGGCGGGTCTTTGTGTTTCAGGGCGAACTCAGCGCTCCAGATGCTGCAGCTTGTCCTTTACACCATCCCAC TCTTCGGCATCCGGCAGCGCCTCTTTCTTCTCGGTGATGTTCGGCCATACTTCGGCCAGATCGGCGTTCAGCTCGATGAACTCCTGCTGATCTTCCGGTA CCTCGTCTTCCGAGAAGATCGCTTGCGCTGGGCACTCCGGCTCGCACAGGGCGCAATCAATGCACTCGTCCGGGTGAATGACCAGGAAGTTCGGGCCTTC
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| Amino Acid Sequence |
>permease
MPRKSWREALATYANPATLALLLLGFAAGLPYMLVFSTLSVWLREAGVARETIGFASLIGLAYAFKWVWAPMLDQWRLPLLGKLGRRRSWLVLSQGLVAI GLIGMANYDPQTHLSSLIALAVLVAFASATQDIAVDAYRLEILGDEHQAALAAAYMTGYRVAALLATAGALYFAEGFGSTAKDYQFSAWTGTYMLFALLM LPGLLTSIWMREPPAPPHIHVAPPKHGFFHQLLAISAVIMLIIAVPTMFIQFYQSDLVPMLLGDVSMQELLYNDRAFLRALLYSTLACVCASGLFWGGLA PVLKTAAARYGFFHQLLSVLLLIILLIAVPAMITQFYESDLHLVLQGQMSLQELLYQDRAFLRALLYTLLTSLSISSLFWGGMAPVLTPINDFIVRYRWQ ALLLLSLIATYRLSDTVMGVMANVFYIDQGFTKEQIASVSKIFGLVMTLLGAGAGGLLIVRFGIMPILLIGAAASAATNLMFMLLVGMGPHLNMLVVTIS CDNFSAGLATSAFVAYLSSLTNLKFSATQYALLSSIMLLLPRLIGGYSGVMVESLGYAHFFLATALMGIPTLLLIIIQWRRDKRQARPETTPPAVEQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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