Pseudomonas alcaliphila 34, D567_RS0118515

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas alcaliphila 34 IIC, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCGCGAGGCCGCCCTGCCGCGTGCCGAGCTGTTGCTCGGACGCCTGTACTACGAAGGCAAGCTGCTGCCGCAACAGCCGAAGAAGGCCGAAGAGCACC TGCGCAAGGCCGCGCCCAGCGAGCCCAGCGCCAGTTACTACCTGGGGCAGATCTACCTGCGTGGCTACCTCGGCGAGGTCTACGCCCAGCAGGCGCTCGA CCACCTGCTCAGCGCTGCGCGCGCCGGCCAGCTCAGCGCCGACTTCGCCCTGGCGCAGATGTTCAGCCAGGGTCGCGGGGTCAAGCCCAACCCGGTCAAC GCCTACGTATTCAGCCAACTGGCCCTGCCGCGCAACACGCCGCCGACCTTCGAGCTGGCCCATGCAGTGGCGCAGAGCCTGACCCCGGCACAACTGGCCG AAGGCCAACGCCTGCTGCGCGAGGAGCGCGATGCCCGCGGCATCGTCCTGCAGCAGCAGGCCGCCCTGCAGGTCAGCCAGCCATGAACAAGGATGCACGC
DNA Sequence for Gene
>D567_RS0118515
ATGCAGCTAAACCGTATCGTCAGCCAGTTGGGCCTGAGCGCCAGCCTGCTGGCAGCCAGCGCCGCCTGGGCGGCGGATGCACCGAAGAATTTCGGCCTGG ATGTGAAGATCACCGCGCAATCGGAAGACGACCGCGACCTCGGCACCCGCGAAGGTGGCGACGTCAGCGGTATCGGTCTCGACCTGCGCCCCTGGGCCTA CGGCGAACGCGGCAACTGGAGCGCCTTCGCCATGGGCCAGGCAGTTACCGCCACCGACACCATCGAAACCGACCCGCTGCAGGACGACGGTGAAAACAGC ACGCAGCGCAGCGACGCGCGCCAACCGGACAAGAGCTACCTGGCCATGCGCGAATTCTGGGTCGACTACGCCGGCCTCACCGCCTACCCTGGCGAGCACC TGCGCGTCGGCCGTCAGCGTCTGCGCAGTGACGAAGGCACCTGGTGGGACACCAACATCGAGGCGGTCAACTGGCGCTTCGATACCACCCTGCTGCAAGC CAACGTCGGCATTGCCGAGCGTTTCTCCGACTACCGTACCGACCTCGACGACCTGGCGCCCGAAGACGAAGACCGCCAGCACTTCTTCGCCGGCCTCGAC TACCAGTGGACGCCCGGCCACCGCATCGGCACCAAGCTGCATCACAGCCGCGATGACGGCCGCCTGGCTAATCCCGGCGAACGCGTCGACGAGCTGAGCA AACGCTACACCGGCGACCTGACCTGGTTCGGCCTGCACGCCGACGGCGGCTTCTTCGAGCGCAACTCGCGCAATCGCCTCAACTACTGGGCGCAGATGAC CTGGCTCAAGGGCGACACCGACCAGCTGCAGCAGCAAGTGGTCGGCAGCGACCGCATCGCCACCGGTTCGCGCAGCCAGGACGTCGACGCCTGGGCCATG GACCTGGGCCTGCGCTACAGCCTCGATGACAACTGGAAGATCGGCGCCGCCTATGCCCGTGGCAGCGGCGGTGGCGACGACGACAAGTCGCGCCAGTTCA TGCAGACCGGCCTGCACAGCAACCGCGCCAATTTCACCGGCGTCGAATCGCGCCTGCATCGCTATGGCGAAGCCTTCCGCGGCGAGCTCTCCAACCTGCA GGTGGCCAGTGCCTTCAGCTCCTGGCAACTGGGTCAGGACTACGACGCCAGCGTCGTCTATCACCGCTTCTGGCGCGTCGATGGCGACCAGGACGTCGGC GACAGCGGTATCACCGCGCCACTGGTGGCTGGCGAGAAAGATATCGGCCAGGAAGTCGACCTGGTGCTGACCCGCTACTTCAAGCAGGGCCTGCTGCCGG CCACCGTCGCCGAACAACTGGAAGACCGTTCGGCCCTGGTACGCCTGCGCGCCGGCGTGTTCCTGCCGGGCGACGCCTACGGCAGCGGCACCGACTCGGT GATGCACCGCGCCTTCGTCGACTTCATCTGGCGCTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGATCGGATCATGCAACCCAACGGCTTAGCCCTACCCCTGCTGCTCGGCGCGCTGTGCCTCACGGTGCCACTGGCCCAGGCCAACCCGACGCAGCACCA GTTCGACTACCGCGTGCGTAGCGCACCGGCGGACGAACTGCATATGGAAGCACCCACGCTGCCGGACCTGTCCGGCTACACCAAGGAGGCCGTGCTGGCC AAGATTCCGCGTGAAAAACGCGGCCAGGTGGTGGTGCGGCGCATGCTGCGCCAGGACGCGCTGAAGGACTTCACCGGCGGCAACGAGCGCCTGCGCGAAT GGATCAAGCGCCAGCAAGGCATGCCCCAGGCGATCTTCATCGAAGGTGGCCTGGTCACCGCCCAGGACATCGCCAAGGCGCTGCCCGACAGCCAGTTCGC CGAGCAGGAGCCGGGCGTGTACCTGGCCCGTCTGCCCATCGTCGTGGCAGAAGGCGCGGCGCTACACGTCGGCAAGGAAACCCGCGAACTGCGCTTGTCG
Amino Acid Sequence
>alginate regulatory protein AlgE
MQLNRIVSQLGLSASLLAASAAWAADAPKNFGLDVKITAQSEDDRDLGTREGGDVSGIGLDLRPWAYGERGNWSAFAMGQAVTATDTIETDPLQDDGENS TQRSDARQPDKSYLAMREFWVDYAGLTAYPGEHLRVGRQRLRSDEGTWWDTNIEAVNWRFDTTLLQANVGIAERFSDYRTDLDDLAPEDEDRQHFFAGLD YQWTPGHRIGTKLHHSRDDGRLANPGERVDELSKRYTGDLTWFGLHADGGFFERNSRNRLNYWAQMTWLKGDTDQLQQQVVGSDRIATGSRSQDVDAWAM DLGLRYSLDDNWKIGAAYARGSGGGDDDKSRQFMQTGLHSNRANFTGVESRLHRYGEAFRGELSNLQVASAFSSWQLGQDYDASVVYHRFWRVDGDQDVG DSGITAPLVAGEKDIGQEVDLVLTRYFKQGLLPATVAEQLEDRSALVRLRAGVFLPGDAYGSGTDSVMHRAFVDFIWRF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site