Pseudomonas alcaliphila 34, D567_RS0118505

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas alcaliphila 34 IIC, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCCGCTGGTACGGCAACAACCTGCGGCAGAACTCGCGCGCCCTGCGTCTGGGCATGGGTCGCCTCGGCGCCTTCACCAGCCTGGTGCTGTTCGACCAGC GCGTGTCGATGTGGACCTGCCTGCTGGGCCTGTGCGTGGCGATCATCGCCAGCATCAAGTACAGCCTGATGTACCTGCTGATCTACCTGCTGTGGATCGG TAGCACGCGGCTGATCCTGACGCTGCTGCTGATGCTCTCCGGCCACCGCATCGGTCCGGCCTACCCGGCGCTGCTCTATTACAACCAGATCGTTGGCGCG ATGGTGAAGATCTACGTGTTCTTCCGCCTCGACCAGCAATCCTGGACGCGCCAGAACACCAAGCTCAACCGCGGCCTGTCCAGCTTCGCCAACTGGTTCA ACAGCTGGTCGTCGCGTGCCATGACCTTCTCTGCCTCCTGTGTCTTCATCGCCGCGCTGCTGGCGCTGGTGTGACCGTACTCGAATAGGAATTAGCCACC
DNA Sequence for Gene
>D567_RS0118505
ATGAACTCCGTCGCCAATCACAACGTCGTCCATGAGTCCGAGGCCCAGCGCCAGCATGCCCGTGTCAAGCTGCCAGGGCGCTTGCGATTCACCAATGCCA AGGGCGAACGCATCGACGCGCGCCTGCAGGATGTCTCTGCTGGCGGTTTCAGCTTCACCAACGAAAAGACCACGCACAAGGTCGGCGATTTCCATCGCGG CCAGTTGCAGTTCCAGCTCGACAGCCTGGTGCTGGGCCTGGACGTGGAGTTTCAGGTCAACTCGGTACAGCCGGAGCACAACCGCGTCGGCTGCCAGTTC CACGGACTTGGCGCACGAGAAGCCGCCGCCCTGCGCCACCTGATCAGCGCGCACCTGGCTGGTGAACTGGTCAATGTCGGCGAGGTGCTGCATATCCTCC AACGCGACAACTTCACCAAGGCGCGCAAGAACGGCGCAGGCGGTGGCATGGGCATGTTCGGCCGCCTGCGCGCCGTGACCTTCAGCGGCGCGATCTTCCT CATCGGTCTGGCTGCGTTCGGCTACATCGGCAAGTCGATCTACGGCCTGTACTTCGTCACCCACGCACAGTCGGCGCAGATCAGCCTGCCGGCGCTGCAG GTGACCATGCCACGTGAAGGCAGCGTGCAGAGCCTGGCGCAGCCCGATGGCATCGTCGAGAAAGGCGCGCCGATCGCCACCTTCACCACCAGCATGCTGG AAATGCTCAAGGGTCACCTGGGTGAAGACCAGCTCGAACCGAGCCAGATCGAAGCGCTGTTCGCCCGCGAGATGCAGGGCACCCTGACCAGTCCGTGCAA CTGCAAGATCTCTCGCCAACTGGTGGCCGACGGTCAGTTCGCCAGCAAGGGCGACGTGATCTTCGAACTGGTGCCGCAGGACGGCATCGCCACCGTCAGC GCCAGCTTCCCCTACCGCCATCTGGAGCAGGCGCGCCCCGGCACGCCAGTGACCTTCAAGGTGGCCGGCGAAGACCAGGCGCGTCACGGCGAGATCGTCA GCAGCGCGCTGCATGATGGCGGTCTGAGCTCGGATATCCGCGTGGTGATCAAGCCGCAAGACACCCTGCCGGCCAGCCTCGCCGGCCAGCCGGTGGATGT GGTCATCGATCGTGGCCCGTCGCTGGGCTGGCTGGTCGACCGCGCCGTCGCGGCAGGTCGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGATCACGCCGTGAGCATGCCCCTTCTTCGCCCTGCTCTGCTCGGCCTCGCCGTCAGCGCCACGCTGGCCGGCTGCGCCGGCCTGCCGGATGAGCGTC TGGCCCGCGAAGCCCTGCAGAGCGGCGACCAGCAAACTGCCGAATGGCATTTCCGCCAGCTCGCCGAGATGGGCTACAGCGACGCGCAGATCGGCCTGGC CGACATCTACGCAGCGGGCGGCCAGACCCAGGATTTGGATGAGGCCGAGCGCATCTACCGCCAGGCCCTGGACGGTTCGCCACGGGCCAAGGCGCGCCTC GGCAAGCTGCTGGCGCGCAAGCCCGGTAGCACCCTGGCCGAGCGCCGCGAGGCCGCCGAACTGCTGGAAAGCGCAGCCCAGGCCCGCGAGCCCAGTGCGC TGCTGCCGCTGACCGAACTCTACCTGTTCTACCCACAGGACTTTCCCGCCATGAACCTCGCGCAACGTATCCAAGACTGGCGCCAGCAGGGCCTGCCGCA
Amino Acid Sequence
>hemolysin D
MNSVANHNVVHESEAQRQHARVKLPGRLRFTNAKGERIDARLQDVSAGGFSFTNEKTTHKVGDFHRGQLQFQLDSLVLGLDVEFQVNSVQPEHNRVGCQF HGLGAREAAALRHLISAHLAGELVNVGEVLHILQRDNFTKARKNGAGGGMGMFGRLRAVTFSGAIFLIGLAAFGYIGKSIYGLYFVTHAQSAQISLPALQ VTMPREGSVQSLAQPDGIVEKGAPIATFTTSMLEMLKGHLGEDQLEPSQIEALFAREMQGTLTSPCNCKISRQLVADGQFASKGDVIFELVPQDGIATVS ASFPYRHLEQARPGTPVTFKVAGEDQARHGEIVSSALHDGGLSSDIRVVIKPQDTLPASLAGQPVDVVIDRGPSLGWLVDRAVAAGR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site