Pseudomonas alcaliphila 34, D567_RS0114865

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas alcaliphila 34 IIC, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TAAGCCTGCTTGGCTTATGGACCGCTGAGGTAGATCAATGCCCGGAAACGAAAAAGGCCACTCGATTGAGTGGCCTTTATCTGAAGGTGGTTGCGGGAGC AGGATTTGAACCTACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGACTGCTCCATCCCGCGTCGACAATTCTACGCTTACTTAATGCCCTGTCAATC GATTTGTTTCGTTTGATCGAAAAAGTTAATTTTTCGTCAAAGCAAAAAGGCCACTCATTGAGTGGCCTTTTCGTGAAGCTGGTTGCGGGAGCAGGATTTG AACCTACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGACTGCTCCATCCCGCGTCTGTGGGTCGGCATTCTACAGTTAGAAGCTTGGCTGTCAACCG CTAATTGCAAGAAAAGTGTTTTCAACTCAGATGCTTAGCGTTAAACAACTGTTAGACTTCCTAGCTCCAGGCCAGGCTGGACGAGGCTTACGAGGGTGTT
DNA Sequence for Gene
>D567_RS0114865
GTGCGCAAGATAATCCACGTCGACTGCGACTGCTTCTACGCCGCCATCGAGATGCGTGACGACCCGAGTCTGGCCAGTCGTCCGCTGGCCGTCGGCGGTT CGGCCGACCGACGTGGGGTAATCGCTACCTGCAACTATGAGGCGCGCGCCTATGGTGTGCGTTCGGCGATGTCGTCGCGGCATGCGCTGAAGTTGTGCCC GGATCTTCTGATCGTCAAGCCGCGCTTCGAGGTGTACCGCTCGGTCTCGCGTGACATTCACGGCATCTTTCGTCAGTTCACCGACCTGATCGAGCCGCTG TCGTTGGACGAGGCCTATCTGGATGTCAGCGACTCGCCGCATTTTGCCGGCAGCGCCACGCGCATCGCCCAGGAAATTCGCCGTCGTGTGGCGCAGGAGC TGCACATCACCGTGTCGGCTGGCGTCGCGCCGAACAAGTTCCTGGCCAAGATCGCCAGCGACTGGCGCAAACCCAACGGGTTGTTCGTGATTACCCCGGA TCAGGTCGATGATTTCGTCGCAGAGTTGCCTGTGAACAAGCTGCATGGCGTCGGCAAGGTCACCGCTGACAAGCTGACGCGCCTGGGAATTCGCACCTGT CTGGATCTGCGGGACTGGAACAAGCTGGCGCTGGTGCGCGAGTTCGGCAGTTTCGGTGAGCGTTTGTGGCGCCTGGCCCACGGCATAGACGAACGTACCG TGCAGGTGGACAGCCGCCGCCAGTCGTTGAGCGTGGAGCACACCTACGATCAGGATCTACCGGATCTGCAGAGCTGTCTGGAGAAACTGCCGGCACTGCT CGAGGAGATGAACGGCCGCCTGCAGCGTCTGGACGCCAGTTATCGACCGGACAAGCCTTTCGTCAAAGTGAAGTTTCATGATTTCACCCAGACCACTCTG GAGCAGGCGGGGGCCAGTCGGGATCTGGAAAGCTACCGGCTATTGCTGAGCAACGCTTTCGCCCGTGGCGACAAGCCGGTGCGCCTGCTCGGGGTGGGCG TCAGGCTGCATGATCTGCGCGGGCGGCAGGAGCAGCTGGAGCTGTTTGCGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGGATGCAATCCGGGAGCTCCTTGCGCGCTATCTCTCGATGCTCCGCTCTGACCTTTATAGGAGTGACCGGGCGGCACGCTGATTCAGCCGCGAATTT CGCGGATAAATCCGCTCCTACAACCCTGTGCAACAGCCAGCTCGATCATGGCCTTCGGGCTACCGCCCCGGATTGCATCCGGGCTACGCCGTCACTGCGG CCAGAGGCGAATCGGCTTGCCGCTGGCCGGCCACAGCTGCAACTGGCCGATGTCGTTGAAGTCCCAGCGTTGCACTTCAGTCAATGCCGCGAGGAAGCGC TGTTCCTGCTCCATCAGTGAGGGCGCGCACATCTTGCGGGTGCTGCCCGGGGCTTCGAAACGGACGGCATCACCCTTTAGCGTGTAGCCGGCGAACCAGT GGTTGCAGCCGGCGTGCCCGTGAGCACGACCGTCCGCGGCAAACGTGACGGTCAGGTGGCTGCGGTCGATCAGCGGGCGTTCGCCGATCCATTCCACTTG
Amino Acid Sequence
>DNA polymerase IV
MRKIIHVDCDCFYAAIEMRDDPSLASRPLAVGGSADRRGVIATCNYEARAYGVRSAMSSRHALKLCPDLLIVKPRFEVYRSVSRDIHGIFRQFTDLIEPL SLDEAYLDVSDSPHFAGSATRIAQEIRRRVAQELHITVSAGVAPNKFLAKIASDWRKPNGLFVITPDQVDDFVAELPVNKLHGVGKVTADKLTRLGIRTC LDLRDWNKLALVREFGSFGERLWRLAHGIDERTVQVDSRRQSLSVEHTYDQDLPDLQSCLEKLPALLEEMNGRLQRLDASYRPDKPFVKVKFHDFTQTTL EQAGASRDLESYRLLLSNAFARGDKPVRLLGVGVRLHDLRGRQEQLELFA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site