Pseudomonas alcaliphila 34, D567_RS0114355

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas alcaliphila 34 IIC, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AACAGGCGCTGGATCTTCCTGAGGAACTGCTGGGCGAGATTCAGGAAACCTTCCTCGACGGCGAGGGCGAGTTACCGGCAGTCAGCGAGATTGCCCCGTT ATTCGCCGGGCGGGTCGATGAGGCGGTGCTCTACTGCGTGCGCGCAGCACTGCAGGCCGAGTTCGAGATCTGAGCGGCCCGCAGTGAAACTCGCCAGCGT GATTCTGGCGGCATTTCGCTCACAGGGCTAACAGGCCGTTGAGAAACGTAGGCGACGACTGCATGGATGCAGGAGGTAGAGCGAAGCAGGAAGCCCGAGC CGAGGCAGCCAGTGCAATACCGATGGCGGCCCCGCAAAAACAGGCGAAAAACGGTCGGAGTCGCGCTCGACTTTACGAGTTGTAAATGAGCATTTGACCG GGCTGGCGTTCCAGCCTGTTTTTAACGCAGCAATGGCAACGCAGGTAGTTTTTCACCGGTCTGCTAAGGTGTGGGCAGGCCGCCAGATAACGAGGTGAGG
DNA Sequence for Gene
>D567_RS0114355
GTGCCTAACTATCACGCCTGGCCCGACGAAGTTCGTTCGAGCCCCTATGCCGACCAGTTGAGCCTGGGCTTTCGTCGGTTGCGTTTTTCCCGCGCTCTCG AGCGTGAATATCGTGCGCACATGCTCGAGGACGGCTTCGAGCTCAAACGTATCGCGCTCTGCGTGGCCACGGTCATCTGGCTGGCCCTGACTGCGCTCGA CATGTTGGTGGTGCCTGCGTCACACCTGGGCTGGGTGATCGCCGTGCGCCTGGTGGTGCTGGTCATCCTGCTGGTTTGCGCGACCCTGATCCTGCGGCGT CGCCACAGCCATCTTCTGTTACCGCTGAGCATGACCTGCATCCTCGTGCTCGGCGTGGGGGCAGCGATGATTGTCGGTATCGCCCATCGCGCCGACCCCG GCTACCCCTACGAAGGTCTGTTGCTGGTGAGCATGGCGGCGTACTTCCTGGTCGGCCTGCGCTTGAACGAGGCCCTTGCCTGTTCCCTGGTGATTTTGCT TGCCTATGTGATAGCGGAATTGGCCGCGGGGCTGCCTGCTCCGAGGCTGATCAACAACCTGTTGTTTCTGGTCTTCGGCAATCTTATCGGCGCTGTCGGT TGCTACCTCCTGGAATACAAATCACGCGAGCATTTTCTGATCAGCCACCTGATGCAGCTCCTTGCCTACCACGACAGCCTGACCGGGCTGCACAACCGTC GTAGCTTCAATCGACAGTTCGAGCGCCTGTGGCGCCAGGCGCAGCGTGACGGCATATCGATTGCGTTGCTGCTCTGCGACATCGACCATTTCAAGGCCTA CAACGACTGCTACGGTCATCAGGCTGGCGACGCGGCTTTGCAGCGTGTCGGCTCACTGATCAAGCAGGCGGCGCGGCGACCACTGGATATGGGCGTACGG CTTGGCGGTGAGGAGTTCGCGCTGCTGTTGTTCGACATCAGTGCCGATGAAGCCAGGCAACGCGCCGAGGCCCTTCGCCATTCGCTGGAGGAGGCAGGCA TTGCCCACCGCGGCTCCGATAGCGCCGATGTACTGACCATGTCCATCGGCGTCGCCTGCCTTAGCCCGGATAGTCAGCCTGAATTGAGCCAGCTCTACGA ACAGGCTGACCGAGCGCTATACGAGGCCAAGGCTTTCGGGCGTAACAGGGTGGCGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTTGCAGTCGGGGCGCAACGAGCCGGTCGCATTCTGCAACGCTCATGGCGCAATCTGCGCTTGCCCTGCGCATCGGGTTATGGCTAGCTGGCTAATAATT AGTTTTTGACCTTTGTATGAGTCCGCTTGCCCATGTCTTACCCCGATCAACATCGCTTTGCCATGCAGGTTGCCCAGCTATCCCGTGCCTGGCGTTCCGA ACTCGATAGACGCCTGGTAGGGCTGGGCCTGTCCCAGGCTCGCTGGCTGGTGCTGCTGCACCTGGCGCGCTTCAGTGAAATGCCGACCCAGCGTGAATTG GCGCAAAGCATCGGCGTAGAAGGGCCGACGCTGGCGCGTCTACTCGACAGTCTCGAAAGCCAGGGGCTGGTTACTCGCGTGGCGGTACCCGAAGACCGCC GTGCCAAGAAGATTGCGCTGCAGCCGGACGCGCAGCCTTTGATCGAGAAGATCGAAGCGATTTCCACCCAACTGCGCCATGAAGTCTTCGCCGGCATCGA
Amino Acid Sequence
>diguanylate cyclase
MPNYHAWPDEVRSSPYADQLSLGFRRLRFSRALEREYRAHMLEDGFELKRIALCVATVIWLALTALDMLVVPASHLGWVIAVRLVVLVILLVCATLILRR RHSHLLLPLSMTCILVLGVGAAMIVGIAHRADPGYPYEGLLLVSMAAYFLVGLRLNEALACSLVILLAYVIAELAAGLPAPRLINNLLFLVFGNLIGAVG CYLLEYKSREHFLISHLMQLLAYHDSLTGLHNRRSFNRQFERLWRQAQRDGISIALLLCDIDHFKAYNDCYGHQAGDAALQRVGSLIKQAARRPLDMGVR LGGEEFALLLFDISADEARQRAEALRHSLEEAGIAHRGSDSADVLTMSIGVACLSPDSQPELSQLYEQADRALYEAKAFGRNRVAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site