Pseudomonas alcaliphila 34, D567_RS0110570 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas alcaliphila 34
GCF_000319815.1|latest |
| Locus Tag |
D567_RS0110570
|
| Name |
ampC
|
| Replicon | IIB |
| Genomic location | 86277 - 87413 (- strand) |
Cross-References
| RefSeq | WP_017676708.1 |
| GI | 516272745 |
| EC Number | 3.5.2.6 |
| NCBI Locus Tag | D567_RS0110570 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
beta-lactamase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.11 |
| Kyte-Doolittle Hydrophobicity Value | -0.128 |
| Molecular Weight (kDa) | 41.4 |
| Isoelectric Point (pI) | 6.32 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AMR gene predictions from CARD database
Identified using the Resistance Gene Identifier (RGI)
| Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
| PRC-1 | PRC-1 is a beta-lactamase that confers resistance to certain cephalosporins and penicillins. [PMID:34975778] | ARO:3007085 | protein homolog model | Strict | 645.2 | 85.75 | 3.2.5 |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001588 (493 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: D567_RS0110570
Search term: ampC
Search term: beta-lactamase
|
Human Homologs
References
No references are associated with this feature.