Pseudomonas alcaliphila 34, D567_RS0110555

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas alcaliphila 34 IIB, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCACCTGCTGTTGTTCTTGTCGTGGGGGCGATTACGCGGTCGTTTCGGCCAAGGCAGCGAGACAGCGCTCCTCGGCGGTATCCAGTTCCAGCTGCATCT GCTGGATATCCAGTAACTGTTGTTCAAGCTGCAGACGGCGCTCGGCGATCTTGCCCATGAAGGTCTCCAGCTGCTTGCGGCTGCCGGTTTCCGGGTCGTA GAGCTCGATCAGCTCGCGGCATTCGGCCAGCGAGAAGCCGATGCGCTTGCCGCGCAGGATGAGTTTCAGCGTCACCTTGTCCTTGGCGCTGTAGACGCGT TCCTGGCCACGCCGCTCCGGCGCGAGCATGCCTTGCTCCTCGTAGAAGCGGATGGCGCGAGTGGTGATGTCCAGTTCGCGGGCCAGATCGGAGATGGAGT AGGTGGTTGCCATGGTCATTGCTCGTTTACCTTTACGTTAACGTAAACCTGTGCAAATCTGGCTGTCAATCTCACTCCACAACAATCACAGAGGTTGAGC
DNA Sequence for Gene
>D567_RS0110555
ATGCGTATCGACGAATCCGTATTCCTGATCAGCGGCGGCGCCTCTGGTCTTGGCCTGGCCACAGCCCGTGAGCTGGTCGGGCGCGGTGGCAAGGTGGTGC TGCTGGATATCAACGCAGAAGCGGGCCAGCAGGCCCTCGCCGAGCTGGGCGGCAACGCCCGTTTCGTATGCGCCGATATCACCCGTGAAGAGGATGGCCA GGCCGCCGTGGCGCAGGCGTTGGCGGCGTTCGCAGCACTGCACGGGCTGGTCAATTGCGCCGGGGTCGCGCCGGCCGAGAAGGTACTGGGCCGCAACGGT GCACATGGCCTGGACAGTTTCCGCCGTACCGTCGAGATTAATCTGATCGGCAGCTTCAACCTGTTGCGCCTGGCTGCCGAGGCCATGGCGCAGAACACGC CGAACACCGAGGGCGAACGCGGGGTCATCATCAATACCGCCTCGGTGGCGGCGTTCGACGGGCAGATGGGCCAGGTCGCTTACGCTGCGTCCAAGGGCGG CGTCGCGGCACTGACGCTGCCGGCGGCGCGCGATCTGGCGCGCTCGGGTATCCGTGTGATGTGCGTTGCCCCCGGCGTGTTCGAGACGCCAATGATGGCC GGTATGCCGCAGGAGGTACGTGATTCGCTGGCGGCCAACGTGCCGTTCCCGCCACGGCTGGGTCGGCCGGACGAATACGCCGCACTGGTACGGCATATCG TCGAGAACGCGATGCTCAACGGTGAAGTGATCCGCCTCGATGGCGCGCTGCGCATGGCGGCGAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGATAGCTAGCCCGGATGCAATCCGGGCCCCCACATATTTCCCGGATTGCATCCGGGCCATGTGATTCGAAGGTGAAACTCATGAAACAGCAACTCGGT CCCGTCGTTATCGTCAGTGCAGTGCGCACGCCCATGGGGGGCTTTCTTGGTGATCTGGCCGGCCTTACGGCGGCCGAACTGGGTGCTGCAGCCATCCGTG CGAGCCTGGAGCTTGCCGGGCTCGCGGCCGAGGCGGTGGACACGGTACTGATGGGCTGCGTGTTGCAGGCCGGCCAGGGCCAGGCACCGGCGCGCCAGGC CGCATTGGGCGCCGGGCTGAGCCAGGCGGTGCAGTGCACCACGCTGAACAAGATGTGTGGCTCGGGCATGCAGGCATTGATGCTCGGTCATGACCAGTTG CTCGCCGGTAGCAGCGAGGTGCTGGTGGCTGGCGGCATGGAGAGCATGTCCAACGCGCCGTACCTGCTGACGCGCGCCCGTGGCGGTTATCGCATGGGCC
Amino Acid Sequence
>3-hydroxy-2-methylbutyryl-CoA dehydrogenase
MRIDESVFLISGGASGLGLATARELVGRGGKVVLLDINAEAGQQALAELGGNARFVCADITREEDGQAAVAQALAAFAALHGLVNCAGVAPAEKVLGRNG AHGLDSFRRTVEINLIGSFNLLRLAAEAMAQNTPNTEGERGVIINTASVAAFDGQMGQVAYAASKGGVAALTLPAARDLARSGIRVMCVAPGVFETPMMA GMPQEVRDSLAANVPFPPRLGRPDEYAALVRHIVENAMLNGEVIRLDGALRMAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site