Pseudomonas alcaliphila 34, D567_RS0106610

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas alcaliphila 34 IC, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AACGGCGGGCTCAGCGAACAGGTCGAAGCCTTCGAGCGCGCCCTGATCGCTGCCGAGCTGAGCCGCCCGCACGGCTCGCTACGCAGCCTGGCCGAGGCGC TGGGTGTGCCGCGCAAGACGCTGCACGACAAGCTGCGCAAACATGGGCTGAATTTCTCAGGCGCTGGCGGAAGCTCGCCAGAGGACTTCGACTGACTGGC GACAAACCGCCAATTTCATCCTTCCAGACCTGTCGCAGGCGGGCTCACACGCCCGCCCAGGTCTCAGCAAAAAGCCATCAAAGCCCACAGCCATGGGCCT TAGCACGGCGCACAAGGTGTGCGCATCGCAGACTGGCACAAGGGTTGCTCTAAGCTAGCTCCAAGCGAACCCACAAGTACAAGTCCAGGCCTCGCTAATG CCACCGGCGTTTTTCTCCAAGCCGCCTAGACTTGCTCTTGTCCGTTCGTCAGCTGCGCCCCGGCGCAAATGCGATAAACACAACAAGAGGAAGCATCCGC
DNA Sequence for Gene
>D567_RS0106610
ATGTTCAAACTGACTGCCAAGGCGCTGGCTTGCGCCCTGTCCCTGTCCATCGCTGGCGTGGTTCACGCTGCCGACCCGATCGTCATCAAGTTCTCCCACG TGGTTGCCGAGCACACTCCGAAAGGTCAGGGTGCCGTGCTGTTCAAGCAACTGGCTGAAGAGCGTTTGGGCGACAAGGTCAAGGTCGAGGTCTACCCGAA CTCCTCGCTGTTCGGCGACGGCAAGGAAATGGAAGCGCTGCTGCTCGGCGACGTCCAGCTCATCGCCCCGTCCCTGGCCAAGTTCGAGCATTACACCAAG CAGCTGCAGGTATTCGACCTGCCGTTCCTGTTCGACGACATGGCTGCAGTCGATCGCTTCCAGAAAGGTCCGGAAGGCCAGAAACTGCTGACCTCCATGA CCGACAAGGGCATCACCGGCCTGGCTTACTGGCACAACGGTCTGAAGCAGCTGTCGGCCAACAAGGCGCTGCTGGAGCCGAAAGACGCCCGTGGCCTGAA GTTCCGCGTACAGGCTTCCGCCGTACTGGAAGAGCAGTTCAAGGCCGTGCGCGCCAACCCGCGCAAGATGAGCTTCGCCGAGGTGTATCAGGGCCTGCAG ACTGGCGTGGTCAACGGTGCCGAGAACCCCTACTCGAACATCTACAGCCAGAAGATGCACGAAGTTCAGAAGTACATCACCGAGTCCAACCATGGTCTGC TGGACTACATGCTGATCACCAACACCAAGTTCTGGGAAGGTCTGCCGGCTGACGTACGCGACGAGCTGAACAAGATCATCGCCGAGGTCACCGTCGAGGT GAACAAGCAGGCTGACGCCCTTAACGAAGGCGACAAGCAGCGCATCGTCGAAGCAGGCACCACCGAGATCCTGACCCTGACTCCTGAGCAGCGCGGCCAA TGGCGCGATGCCATGCAGCCGGTATGGAAGAAGTTCGAAGGCGAGATCGGCGCTGACCTGATCAAGGCCGCGCAAGCTGCCAACCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAAGGCCGGAGAGCCGTAGGGTGGGCAGAGCGTCGATGCTCTGACCCACCACGACGCCCGCGACGGGCGTCGATCAACGCTGTAACCGGTGGGCCGGCTA CCGTCCCACCCTACGCACTTTCCATTCGGGAGAACCGACCATGAACGCCTTGCGGCGCGTCTGGGAGCACTTCGAGGAAGGCTTTATCGCTTTCCTCCTG GCGGCCATGACGCTGATCACTTTCGTCTACGTGATCCTCAACAACTTCTACACCCTGTTCTATTGGCTGGGTGATGCCTTCGGCGGTAACGAGTTTCTGC TCGCTATCGGCGACGCCATTCTCGACATGGCCCAGGCGATGACCTGGAGCAATGCCCTGACCAAGGCCCTGTTCGGCTGGCTGATCTTCTTCGGCCTGGC CTATGGCGTGCGCACCGCCGGCCACATCGGCGTCGATGCCCTGGTCAAACTCGCCCCGCGCGGCGTGCAGCGCGTCATCGGTGTGATCGCCTGCTCGGCC
Amino Acid Sequence
>C4-dicarboxylate ABC transporter
MFKLTAKALACALSLSIAGVVHAADPIVIKFSHVVAEHTPKGQGAVLFKQLAEERLGDKVKVEVYPNSSLFGDGKEMEALLLGDVQLIAPSLAKFEHYTK QLQVFDLPFLFDDMAAVDRFQKGPEGQKLLTSMTDKGITGLAYWHNGLKQLSANKALLEPKDARGLKFRVQASAVLEEQFKAVRANPRKMSFAEVYQGLQ TGVVNGAENPYSNIYSQKMHEVQKYITESNHGLLDYMLITNTKFWEGLPADVRDELNKIIAEVTVEVNKQADALNEGDKQRIVEAGTTEILTLTPEQRGQ WRDAMQPVWKKFEGEIGADLIKAAQAANQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site