Pseudomonas alcaliphila 34, D567_RS0104560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas alcaliphila 34 IB, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCGGCTCTCCTGAGCCTGGTATTTCCATGCCGAGCTTTTGGATGATCCCACAGCCCTCGGGCTGTTCTTTTTGTATCAGGAGCGTCTAGCCCATGAGTA TGCAGGACCCGTTAGCGGACATGCTAACTCGTATCCGTAATGCCCAGATGGCTGAAAAGTCCGTCGTAAGCATGCCTTCTTCCACTCTGAAGGTAGCCGT AGCCAAAGTTCTGAAAGACGAAGGTTACATTGCGGGTTATGAAGTCAATGGTGAAGCCAAGCCACAACTGTCCATCGAGCTGAAGTACTTCGAAGGCCGT CCGGTCATCGAGGAAGTCAAGCGCGTGAGCCGTCCTGGCCTTCGTCAATACAAATCCGTCGATGACCTGCCGAAGGTTCGCGGCGGTCTCGGTGTTTCCA TCGTCTCCACCAATAAAGGTGTGATGACGGATCGCGCTGCGCGCGCTGCCGGTGTCGGCGGCGAAGTGCTCTGCACCGTGTTCTAAGGGGGGGGATAAGC
DNA Sequence for Gene
>D567_RS0104560
ATGTCTCGCGTTGCTAAGAACCCCGTTGTGCTGCCTGCCGGTGTCGAGATCAAACTCGCCGGTCAGCAGCTCTCGGTCAAGGGTGCCAAGGGCGCTCTGG AACTGAACGTTCACTCGTCCGTGGAAGTGATCCAGGAAGGTAGCGAACTGCGTTTCGCCGCTCGTAATGGCGACCAGCAGAACCGCGCTATGGCCGGTAC TACTCGTGCTCTGGTGAACAACATGGTCATCGGTGTCAGCCAAGGCTTCGAGCGTAAGCTGCAACTGGTCGGCGTGGGCTACAAAGCTCAAGCCAAAGGC CAGGTGCTGAACCTCGCACTGGGCTTCTCCCACCCGATCGACTACGAATTGCCGGAAGGCGTCGTGGCTGAAACCCCGAACCAGACCGAAATCCTGATCA AGGGTATCGACAAGCAACTGGTGGGTCAGGTGGCTGCGGAAATCCGTGACTTCCGTCGTCCTGAGCCCTACAAGGGCAAAGGCGTTCGTTACGCGGATGA AGTTGTCCGTCGTAAAGAAGCCAAGAAGAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGGCTGAAAAATGACCGACAAAAAAGTTACTCGTCTGCGTCGCGCTCGCAAAGCACGCCTGAAAATGCACGAGCTCGAAGCCGTGCGTCTGTGCGTGTA CCGCTCTTCGCAGCACATCTACGCCCAGGTCATCTCGGCCGACGGCAGCAAGGTTCTGGCCAGCGCCTCTACCTTGGACAAAGCACTGCGTGATGGCGCC ACCGGCAACGTCGACGCAGCCAAGAAAGTTGGTGCGCTGGTTGCTGAGCGTGCGAAAGCCGCTGGTGTGACCCAGGTGGCATTCGACCGTTCTGGCTTCA AGTACCACGGCCGCGTCAAGGCGCTGGCTGATGCTGCTCGTGAAGGCGGGCTGGAGTTCTAAGTTATGGCAAATAACGACCAAAAGCGCGACGAAGGCTA CATCGAGAAGCTGGTTCAGGTTAACCGCGTTGCCAAGACCGTAAAGGGTGGCCGTATCTTCACTTTCACCGCGCTGACCGTGGTAGGTGATGGCAAGGGT
Amino Acid Sequence
>50S ribosomal protein L6
MSRVAKNPVVLPAGVEIKLAGQQLSVKGAKGALELNVHSSVEVIQEGSELRFAARNGDQQNRAMAGTTRALVNNMVIGVSQGFERKLQLVGVGYKAQAKG QVLNLALGFSHPIDYELPEGVVAETPNQTEILIKGIDKQLVGQVAAEIRDFRRPEPYKGKGVRYADEVVRRKEAKKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site