Pseudomonas alcaliphila 34, D567_RS0100050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas alcaliphila 34 IA, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGGTCTTGTTGGATTTGCAGAATTTGCACTCGCCGCACTCGGCGGTGTACAGCGGGATCACGTGGTCGCCGACCGTCAGCGAGGTGACCCCCTCGCCCA CCGCCTCGACGATGCCACCACCTTCGTGACCGAGAATGCAGGGGAACACGCCCTCGCTGTCCTGGCCGGACAGGGTGTAGGCGTCGGTGTGGCAGACGCC GGTCGCGACGATACGCACCAGCACCTCGCCGGCCTTGGGCGGCGCCACATCGACTTCGACGATTTTCAGGGGTTCATTCGGGGCGAAGGCGACGGCGGCA CGAGACTTGATCATGACAGTTCTCTCAGGGGAGCGTGGACAGTGGTCGGCAGTCTAGTTCATGTCCAATACGAGATAATCAGCAGAAGAGCAAAACATTA TTGCTGTACAGGGATAATATTGGGTCTCCTTACATTGCCCGCAAGCGGGCTCCTACAGGGGCAGCCGGATGCAATCGGCAGCACAGGAGAAGAAGCATCG
DNA Sequence for Gene
>D567_RS0100050
ATGAATCGCTGGGAAGGACTCGACGAATTCGTTGCCGTCGCCGAATGCGGGCAATTCAGTGCCGCCGCCGAGCGCCTGGGATTGTCCACCTCGCAGGTCA GCCGCCAGGTCGCACGCCTGGAAGAGCGCCTGCAGAGCCGCCTGTTCTACCGCAGCACCAGACGGGTCGCGCTGACCGAGGCCGGCCAGTTGTTTCTACA ACACTGCCAGCGCCTGCAGGATGCCCGCGAAGAAGCGCTGCGAGCAGTCGGTGATCTCGGCGCTGAACCCAAGGGGCTGTTGCGCATGACCTGTGCGGTG GCTTACGGCGAGCGCTTCATCGTACCGCTGGTCAACGACTTCATGGCGCGGCATCCGCAATTGCGCGTGGAGATCGAACTGTCCAACCGTCAGCTCGACA TGCTGCACGAAGGCCTGGACCTGGCCATCCGCCTGGGGCGCCTGCAGGACTCGCGTCTGATGGCCGCACGCCTGGCACCTCGCGAAATGTACCTGTGCGC AGCCCCCGACTATCTGCAGCGCTACGGGCGTCCGCACTCGTTATCCGAGCTAGCCCGACACAACTGCCTGGTAGGTAGCAGCGACCACTGGAGCTTTGCC CAGAACGGCCGTGAAACCCAGGTGCGCATACAGGGTAACTGGCGTTGCAATAGCGGCCAGGCCGTGCTCGACGCAGCGCTGCGCGGTTTTGGGCTGTGTC AGTTGCCGGACTATTACGTATTGGAACACCTGCGCAGCGGCCGGCTGATCTCCCTGCTGGAGCAGCACCGCCCACCCAACACAGCCGTCTGGGCACTCTA TCCGCAGCAGCGACATCTCTCGCCCAAGGTACGTCAGTTGATCGACTCGCTGCGCCAGGGACTTGGCCAACGCGCCGAATACCTCGATCACTCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTTCTGCAACAACCTTGTCACCCAGCTGAACGGTCATGGAATGTCACAAGCCGGGGCGAAACTTGAGCGAGGCGACCGCGTCACAACCCATGCACCCCG CCCAAACGGGGCCTCACGAACTCAGCTACATGAGGACATGGTTATGCAGGTTCTGGTCAACAGTGGTAAGCACGTCACCTCCTCGATGGACTTCAAGGAC GACATTCGCAGTCGCATCCGGGACAAGCTCCAGCGCTACGAGGACCACCTAACCCGGATCGAAATTCATCTCTCCGACGAGAACGCGCTCAAGAGTGGCC CACAGGACAAGCGCTGCAAGGTCGAGGCGCGGATGAAGGGACGCGATCCGCTGACGGTCTCCCACGATGCCAGCGAACTGCAGCAGGCGATCGACGGCGC CATGAACAAGCTGACTAACGCGCTGGATCGCAACCTGGGCAAAGATGCCAAGCGCTGGACACACTGATGCGACAGTTCTAGTTCAACGGTCTTGCGGCCA
Amino Acid Sequence
>LysR family transcriptional regulator
MNRWEGLDEFVAVAECGQFSAAAERLGLSTSQVSRQVARLEERLQSRLFYRSTRRVALTEAGQLFLQHCQRLQDAREEALRAVGDLGAEPKGLLRMTCAV AYGERFIVPLVNDFMARHPQLRVEIELSNRQLDMLHEGLDLAIRLGRLQDSRLMAARLAPREMYLCAAPDYLQRYGRPHSLSELARHNCLVGSSDHWSFA QNGRETQVRIQGNWRCNSGQAVLDAALRGFGLCQLPDYYVLEHLRSGRLISLLEQHRPPNTAVWALYPQQRHLSPKVRQLIDSLRQGLGQRAEYLDHS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site