Pseudomonas stutzeri MF28, L686_23020

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri MF28 contig73, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCGGCCTGCTCAAGCAAAGCGTCGGCGGGTTGCAACAGGCGCTGCGCACCCGTGGGGAGCTGAAAAATGAGATGCGCCTGTCGCTTACTACCGTGCAGA GCGCCGGAAACAACCCGCTCAAACACAGTATCGACAGTGGCGAAGCGCTGAATCTGCTGTTACGCGGCGGCAAAGCGGGTCAGCTGCCGGCCGAACAGGC CGTGGGGCGCGCCTATCGCGACCTGCAGGCACACCAGGTGGCCATGTTGGCCGCCAGCCGCGCGGCCATCAAGAGCATGCTCGAGCAATTCTCCCCAGAC CACTTGGCATTGCGCTTCGAGCGTGACAACAAACCGCTGATTGCCACCGCAGGGACCCGCTGGCGCGCCTATAAGCGCCTGCATCTGGCCATGCAACGTG ACGACGATTGGAGCGAACGGCTGTTCGCCCGCGATTTCGCCCAGACGTACGAGGAACAGGTACGCCTGATCGCCACGCTCAACACCGACCTTCAAGGATG
DNA Sequence for Gene
>L686_23020
ATGTCCATGTCTCGCTTTCTCCCCGCCGCGCTGATCGCAGCGCTGGCTGTGCTCGGCGGTTGCTCGGCGCTATCGCCAAATTCCTACCTGACCAAGCTGG ACCTGTCGCTACAAGGAAGCGACCGGCTCAACCCCGACCTCAACGACCGGCCCTCGCCCATCGTGATTCGCCTGTTGGAACTCAAGCATCCGGTGGCCTT CGAGAATGCCGATTTCTTCTCGCTCTACCAGCGACCCAAGGAAGCCCTGTCCCCGGACCTGGTAATCCAGGAAGAGCTCGAATTGCGCCCGGGCGAGCAG CGCGACCTCAAGCTCTTCGTCCAAGACGGCAGCCGCTACGTCGGTGTGTTGGCCGCCTACCGTGACCTGCCCGAATCGAGCTGGCGCTTCGTCATTCCCC TTGAGCACAAGGCGCAGAACCGTATCGAGCTGCGTCTCGACGAGCGCGGCATTCAAATCGTCGATCCGCTCACGAAGGGGAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGATGAGCATGAACAAAGTGATCTGGCAGGAGGGCATGCTGCTGCGTCCGCAGCACTTCCAGCAAAGCGACCGCTATTACGACGCGCAGCTCAAGCTGC GAACCCAGAAGTTGGGCCATTACGCCTGGGGCTTTTTCGAGCTGGAGATCGACCGCCAGTTTCTCAACATGGGCAAGCTGGTGCTCAGCCAGGCCAGTGG CCTGCTTCCGGATGGCAGCCTGTTCGAGATTGGCGCCGAGCGTGAACCATTGGCCCTGGACGTGCCGCCCAATACCGGCAATACACCTGTCTACCTGGCA CTACCGCTGGTGACCGGCAACCACATCGAAAGCCGTCGGCCGGAGCAGAAGGACGTGCTGGCGCGCTACACCGCGCTCGATGAGGAAGTCGCCGACTCCA ACGCCGGTGATAGCAGCAGTAGCCAGGTCAGCACCGGCCGACCGGACTTTCGCCTGCTGCTGGGTGAGCAACAGAGCGACCAGGCTTACGTAAAGCTCAA
Amino Acid Sequence
>type VI secretion protein
MSMSRFLPAALIAALAVLGGCSALSPNSYLTKLDLSLQGSDRLNPDLNDRPSPIVIRLLELKHPVAFENADFFSLYQRPKEALSPDLVIQEELELRPGEQ RDLKLFVQDGSRYVGVLAAYRDLPESSWRFVIPLEHKAQNRIELRLDERGIQIVDPLTKGN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site