Pseudomonas stutzeri MF28, L686_22080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri MF28 contig52, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGCCAGTCACCGGATTCATGCTCATCGATACCCTGCTCAGTGACGAAGAAGGTGCTTTTCTAGATGCGCTGCACCACATGATCCTGCCCGCCATCGTG CTGGCGACGATTCCACTGGCGGTGATCGCTCGCATGACCCGCTCGGCGATGCTCGAAGTGCTACGCGAAGATTACGTCCGCACGGCCCGGGCCAAAGGCC TGTCGCCGAACCGGGTGGTATTCGTCCATGGGCTGCGCAACGCGCTGATTCCCGTCCTCACGGTGTTCGGGCTGCAGATCGGCACATTGTTGGCCGGAGC GGTGCTTACCGAGACCATCTTCTCCTGGCCCGGCATCGGCAAGTGGCTGATCGAATCCATCGGCGCACGCGACTATCCGGTGGTGCAGAACGGCATCCTT TTGGTCGCCTGCCTGGTCATCTTGGTCAATTTCACCGTGGATATTCTCTACGGGCTGGCCAATCCCCGCATTCGTCACCAGCGTTAAGGAGGTCGGGCAC
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| DNA Sequence for Gene |
>L686_22080
ATGAACCACATCGACACCCTGCCGGCCGCCGAGCCGACCACCGAGTACCCTTCACCGCTCCGGGAGTTCTGGAGTGCCTTTCGCCGCAACAGAGGCGCGC TGGGCGGCCTGATCTTCATGTCGCTGCTGGTCATCTGCGCCTTGTTCGCGCCCGCCCTGGCGCCGTACAACCCCACCGAACAGTTCCGCGACTTCCTGCT CACCCCGCCCGCCTGGCAAGAGGCCGGCACGTCACAGTTTCTATTGGGCACCGACGAGCTGGGACGGGACATGCTGTCGCGCCTGATTCATGGCGCGCGG CTGTCCCTGTTGATCGGCCTGGCCTCGGTCGTTTTCTCGTTGATCCCCGGCATCCTGCTCGGGCTATTGGCCGGTTTTTCCCCCACGGGAATCGGCCCGT TCATCATGCGTCTGATGGATATCATGCTGGCCCTGCCCTCACTGCTGCTGGCGGTGGCAATCGTGGCGATTCTCGGCCCGGGCCTGATCAACACCATCTT CGCGATTGCCATCGTGTCACTGCCCTCCTATGTACGCCTGACCCGCGCGGCGGTGATGACCGAACTCAATCGCGACTACGTCACCGCTTCGCGGCTGGCC GGCGCCGGAACGCTGCGGCTGATGTTCGTCAGCGTGTTGCCCAACTGCATGGCGCCGCTGATCGTGCAGGCCACGCTGAGTTTTTCCTCGGCCATCCTGG ATGCGGCGGCGCTGGGCTTTCTCGGTCTTGGCGTCCAGCCGCCGACGCCCGAATGGGGAACGATGCTGGCCTCGGCTCGCGACTACATCGAACGCGCCTG GTGGGTGGTCTCCCTGCCCGGCCTGGCGATCCTGCTCAGCGTGCTGGCAATCAATCTGCTCGGTGACGGCCTGCGCGACGCGCTGGATCCGAAGCTCAAG AACGCCGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAAGTCTTCGATGCGTGATTCAAGCCGTACACAAACGGAGGACAACCGGCCATGAGCCTCCTCGAAATTCAAAACCTGTCGGTGCGTTTCGGCGACGAC GGCGCACCGCCGGTCGTCGACGGGCTGGACCTCCGTGTCGAGCGGGGCGAAGTGCTGGCTATCGTCGGTGAATCCGGTTCCGGTAAATCCGTGACCATGA TGGCCCTGATGGGGTTAATAGACCCGCCGGGCAAGGTGGCGGCTGATCGCCTCCGGTTTGCCGACCAGGACCTGCTGACACTCAAAGGGCGCCAGCGTCG TCGCTTGATCGGCAAAGACCTGGCGATGGTTTTTCAAGATCCGATGACCGCGCTCAACCCCAGCTACACGGTTGGATTCCAGATCGAGGAAGTGCTGCGC CAACACCTGGGCCTCAAGGGCAAGGCCGCTCGGCAACGCGCGCTCGAACTGCTCGAACGGGTGGAAATCCCCGGCGCAGCCAGCCGCCTCGATGCCTATC
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| Amino Acid Sequence |
>peptide ABC transporter
MNHIDTLPAAEPTTEYPSPLREFWSAFRRNRGALGGLIFMSLLVICALFAPALAPYNPTEQFRDFLLTPPAWQEAGTSQFLLGTDELGRDMLSRLIHGAR LSLLIGLASVVFSLIPGILLGLLAGFSPTGIGPFIMRLMDIMLALPSLLLAVAIVAILGPGLINTIFAIAIVSLPSYVRLTRAAVMTELNRDYVTASRLA GAGTLRLMFVSVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLAILLSVLAINLLGDGLRDALDPKLK NAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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