Strain | Pseudomonas stutzeri MF28 contig52, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCATGTTGATCGGCTGGACGGGCGACAATGGCGATCCTGACAACTGGCTCAACACCCTGTATGGCTGCGATGCGGTGGGCGGCAACAACTTTTCCATGTG GTGCGATCCTGAATACGACAAGGTCGTCAAACAGGCCAAGCGCATGACAGATCAGGCTGAGCGCACCAAGCTTTACCATCAGGCGCAGCACATCATTCAG GAGCAGGTGCCCATCACCCCCATCGCGCACTCGACTGTCTACCAGCCGATGCGCAACAGCGTTGAGGGCTTCAAGATCAGCCCGTTCGCACTCAACTCCT TCTACGGCGTGGAAAACAAGCGCTAGTGAGATGAGCAACCGGGCTGGCCTGCGGGCTGGCCCGGTTGTCGCTCGCGCTTTGCCTACCAGCCCCGACCCGC GTTCGACGATAGCCGAATCGGTCGTGGTTGATCAGCCGGCGCGCAATCGCCTCGCCGACACACATGTCGTCGGCAACGCCCGATCAGGAGTTCTGTCACG
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DNA Sequence for Gene |
>L686_22075
ATGTTCAGTTTCGTTGCCCGCCGGTTGAGCCTGCTGATCCCGACCTTTTTCGGGATCACGCTGCTCACCTTCGCCCTGATTCGCATGATCCCGGGCGACC CGGTGGAAGTGATGATGGGCGAGCGCCGGGTCGACCCGGAGTTACATGCCCAGGCCATGGAGCGCCTTGGCCTGAACAAACCACTCTACCTGCAATATAT CGACTACATCGGACGACTCGCCCAGGGTGACCTCGGCGAGTCGTTGCGCACCCGCACCAGCGTCTGGAAGGAATTCACCACGCTGTTTCCGGCGACGCTC GAACTGGCCATCGCCGCGCTGGTCATCGCCGGTACGCTCGGCGTCCTTGCCGGCGTGATAGCAGCCCTCAAGCGCGGCTCGCTGTTCGACCATGGGGTGA TGGGCATATCGCTGGTCGGTTATTCAATGCCGATTTTCTGGTGGGGGCTGATCCTGATCATGTTCTTCTCGGTCGGCCTGGGCTGGACGCCCGTGTCGGG ACGCATCGATCTGCTCTACGACGTGCAGCCAGTCACCGGATTCATGCTCATCGATACCCTGCTCAGTGACGAAGAAGGTGCTTTTCTAGATGCGCTGCAC CACATGATCCTGCCCGCCATCGTGCTGGCGACGATTCCACTGGCGGTGATCGCTCGCATGACCCGCTCGGCGATGCTCGAAGTGCTACGCGAAGATTACG TCCGCACGGCCCGGGCCAAAGGCCTGTCGCCGAACCGGGTGGTATTCGTCCATGGGCTGCGCAACGCGCTGATTCCCGTCCTCACGGTGTTCGGGCTGCA GATCGGCACATTGTTGGCCGGAGCGGTGCTTACCGAGACCATCTTCTCCTGGCCCGGCATCGGCAAGTGGCTGATCGAATCCATCGGCGCACGCGACTAT CCGGTGGTGCAGAACGGCATCCTTTTGGTCGCCTGCCTGGTCATCTTGGTCAATTTCACCGTGGATATTCTCTACGGGCTGGCCAATCCCCGCATTCGTC ACCAGCGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAGGTCGGGCACATGAACCACATCGACACCCTGCCGGCCGCCGAGCCGACCACCGAGTACCCTTCACCGCTCCGGGAGTTCTGGAGTGCCTTTCGCCGC AACAGAGGCGCGCTGGGCGGCCTGATCTTCATGTCGCTGCTGGTCATCTGCGCCTTGTTCGCGCCCGCCCTGGCGCCGTACAACCCCACCGAACAGTTCC GCGACTTCCTGCTCACCCCGCCCGCCTGGCAAGAGGCCGGCACGTCACAGTTTCTATTGGGCACCGACGAGCTGGGACGGGACATGCTGTCGCGCCTGAT TCATGGCGCGCGGCTGTCCCTGTTGATCGGCCTGGCCTCGGTCGTTTTCTCGTTGATCCCCGGCATCCTGCTCGGGCTATTGGCCGGTTTTTCCCCCACG GGAATCGGCCCGTTCATCATGCGTCTGATGGATATCATGCTGGCCCTGCCCTCACTGCTGCTGGCGGTGGCAATCGTGGCGATTCTCGGCCCGGGCCTGA
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Amino Acid Sequence |
>peptide ABC transporter permease
MFSFVARRLSLLIPTFFGITLLTFALIRMIPGDPVEVMMGERRVDPELHAQAMERLGLNKPLYLQYIDYIGRLAQGDLGESLRTRTSVWKEFTTLFPATL ELAIAALVIAGTLGVLAGVIAALKRGSLFDHGVMGISLVGYSMPIFWWGLILIMFFSVGLGWTPVSGRIDLLYDVQPVTGFMLIDTLLSDEEGAFLDALH HMILPAIVLATIPLAVIARMTRSAMLEVLREDYVRTARAKGLSPNRVVFVHGLRNALIPVLTVFGLQIGTLLAGAVLTETIFSWPGIGKWLIESIGARDY PVVQNGILLVACLVILVNFTVDILYGLANPRIRHQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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