Pseudomonas stutzeri MF28, L686_21135
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri MF28 contig46, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTCTGCTCACCGATCAGGATGGCGAAGTCGCTATTGTCCTGGGGCAGCATCATATTCGCGCTACGACCGGCGAGTTCACCTTCACCTCGAAGCTCGTCG ATGGGAAATTCCCCGACTATGAACGCGTGTTGCCGCGTGGCGGTGACAAGCTGGTGGTGGGTGAGCGGCAGACGCTGCGCGAAGCGTTCAGCCGTACCGC GATCTTGTCCAACGAAAAGTATCGGGGTATCCGCCTGCAGCTTGAGAGCGGGTTGTTGAAGATTCAGGCTAACAACCCCGAGCAGGAAGAGGCCGAAGAA GAGGTTGCAGTCGACTATTCGGGAGGCTCGTTGGAAATCGGTTTCAACGTCAGCTACTTGCTTGATGTGCTGGGCGTCATGACCACAGATCAGGTCCGAC TGATTCTGTCCGATGCCAACAGCAGCGCGCTGGTTCAAGAGTTCGATAACGACGATTCGGCGTACGTCGTCATGCCGATGCGCTTGTAACCCACCACTGA
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| DNA Sequence for Gene |
>L686_21135
ATGTCACTTAGCCGTATCTCCGTCACCGGCATCCGCAATCTGCAGCCGGTGACGTTAAACCCCTCTCCCCGCATCAACATCCTCCATGGCGACAACGGCA GCGGGAAAACGAGTTTTCTCGAGGCCATTCACCTGCTCGGTATGGCGCGCTCTTTCCGTAGCACCCGTTTGAATCCGGTGATCAGCCACGAACAAAGTAA CTGTACGGTCTTCGGGCAGGTCGAGCTGGCGCAGGAGCAGTCCAGCGCGCTTGGTATTTCTCGAGATCGAAATGGCGAGGTGAGGATCCGCATCAACGGC CAGAGCGTAAGAAGCGCCGCTGAGCTGGCCGATGCGTTGCCCTTGCAGCTCATCAATCCTGACAGTTTCCGTTTGCTCGAAGGCGCGCCCAAGCTTCGGC GCCAGTTCCTCGATTGGGGGGTGTTTCACGTGGAACCTCGATTCTTGCAGGCCTGGCAACGGCTTCAGCAGGCGCTCCGGCAACGGAACTCGTGGCTGCG GCATGGTACACTGGACGCCGCTTCGCAAGCGGCGTGGAGCCGTGAGCTCAGTGCCGCGAGCGATGAAATAGATGGCTACCGGCGGGCATACATACAGGCC TTGAAGCCGGTATTCGAACGTACCTTGGCTTCGCTGTTGTCGCTTGAAGGCTTTCAGTTGAGTTACTACCGCGGCTGGGACAAAGAGCGTCCTCTGGCTG AGGTTTTGGCTGCATCGATCGAGCGGGACAGGCTGATGGGACATACCCAGGCAGGGCCCCAGCGCGCCGACCTGCGGTTGCGGATCGCTAACCATAACGC AGCAGAGACGTTATCACGCGGTCAACAGAAGCTGGTGGTCTGTGCCCTGCGGATCGCCCAGGGACATCTGGTGAGCGAAACGAAGCGCGGTCAGTGTATT TATCTGGTCGATGACCTCCCGTCCGAATTGGACGACCAACACCGGCTTGCGTTGTGCCGGTTGCTGGAACAGCTGAATTGCCAGGTTTTCATTACCTGCG TCGATTCGAACGTATTGCGAGAAGACTGGCGTGAAGATACGCCGGTCTCAATGTTTCACGTGGAACATGGTGCGATAGCCCAAGTCCACGGCCCCTCGGG AGTGAAGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGAAAACCACACGTACGATTCGTCCAGTATCAAGGTTCTAAAAGGTCTTGATGCCGTACGTAAGCGTCCCGGCATGTATATCGGCGACACCGACGACGG GACCGGCCTGCACCACATGGTATTCGAAGTCGTCGATAACTCCATCGACGAAGCGCTG
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| Amino Acid Sequence |
>recombinase RecF
MSLSRISVTGIRNLQPVTLNPSPRINILHGDNGSGKTSFLEAIHLLGMARSFRSTRLNPVISHEQSNCTVFGQVELAQEQSSALGISRDRNGEVRIRING QSVRSAAELADALPLQLINPDSFRLLEGAPKLRRQFLDWGVFHVEPRFLQAWQRLQQALRQRNSWLRHGTLDAASQAAWSRELSAASDEIDGYRRAYIQA LKPVFERTLASLLSLEGFQLSYYRGWDKERPLAEVLAASIERDRLMGHTQAGPQRADLRLRIANHNAAETLSRGQQKLVVCALRIAQGHLVSETKRGQCI YLVDDLPSELDDQHRLALCRLLEQLNCQVFITCVDSNVLREDWREDTPVSMFHVEHGAIAQVHGPSGVKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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