Pseudomonas stutzeri MF28, L686_21125
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri MF28 contig46, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GATGCGTTACCTGGTGATCCGTTGCGGGCCGGAATGGCCCCCTTTTAAGAGACCGGCGATTGTAGAGAACCTGCGTGCCCAGGTCAATTTCCAACCAACA CCCTAGACGGAGAAATTAAATAGAAGAAAAGAACTAAAGCTTTCTTAATGCAGAGCTTATATATGTGCGGCCGGTTATCTGTGGATAGAACCTTGCAAGC CAAGCACTGCGGGCCTTGCGCCAGAGCCGAAACCTTCTGTGGAAACGGTGCGTTCACGGTGGGCATGGCTTGGGTTTCCTGTGGACGGTTTAAAGGTTTA TCCACAGCAGCGGTTTTGCTCAAGCGATCCACAGCCTTTTCCTACGCCTTCAAGGCGGGTTATCAACAGCTCTCCGTAATCCGTATAGGCGGCGTTGGAT ATGCCTGTAACCGAGATAAAAGCCTTCGCTTTGTGGATAACTGCCCGTCTGGAAGCTACAATGGCTGCCGTTTAAAGCTCGACAGCGTCTAGGAGATTCC
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| DNA Sequence for Gene |
>L686_21125
GTGTCGGTGGAACTTTGGCAGCAATGCATTGACCTCTTGAGAGATGAGCTGCCGGCCCAGCAATTCAACACATGGATCCGGCCGCTTCAGGTCGAGGCCG AAGGGGACGAGCTGCGGGTTTACGCCCCGAATCGGTTCGTTCTCGACTGGGTGAACGAAAAGTACCTGTCCCGATTGCTCGAACTGCTGTCGGAGCGCGC CACCGGCTTGGCGCCGTCGTTGTCCCTGTTGATCGGTAGCAAGCGTACGGCGGCTGCGCCGCAGTCATTAGCGTCGGCGACTCGCAACCAGCAGCCGATC GGCTCGCCTGCCGCCGCCGCTCCCCCACAAGCTGGGCCAGCGGAAGCTCCGGTCATGGCTGCGGTCGAGGCCTCTCCTACTGTTGCTCCGGCGCGTGCCG AGCGCAACGTACAGGTCGAAGGTGGCCTCAAGCACACCAGCTATCTCAATCGCACCTTTACCTTCGAGAATTTCGTCGAAGGTAAGTCGAACCAGCTGGC ACGTGCCGCTGCCTGGCAGGTCGCAGATAATCCGAAGCATGGCTATAACCCGCTGTTCCTTTATGGCGGCGTAGGTCTCGGCAAAACGCACCTGATGCAC GCGGTAGGCAACCATCTGCTGAAAAAGAACCCCAACGCCAAGGTGGTCTATCTCCACTCCGAGCGATTTGTGGCTGACATGGTCAAGGCGTTGCAACTGA ACGCGATCAACGAGTTCAAGCGCTTCTACCGCTCCGTGGACGCGCTACTGATCGATGACATCCAGTTCTTCGCCAAGAAAGAACGATCCCAGGAGGAGTT CTTTCACACCTTCAATGCCCTGCTCGAAGGCGGGCAGCAGGTGATCCTGACCAGTGATCGCTACCCGAAGGAGATCGATGGGCTGGAGGAGCGACTGAAG TCGCGGTTCGGCTGGGGTCTGACCGTAGCTGTCGAGCCACCCGAACTCGAAACGCGGGTGGCGATCCTGATGAAGAAGGCGGACCAGGCCAATGTCGACT TGCCACACGACGCGGCATTCTTCATTGCTCAGCGAATCCGCTCTAACGTCCGCGAGCTTGAAGGCGCGTTGAAGCGTGTTATCGCCCATGCGCACTTCAT GGGGCGTGATATCACCATTGAACTCATCCGCGAATCCCTGAAGGATTTGCTCGCGTTGCAGGATAAGCTGGTAAGCGTCGACAACATCCAGCGCACGGTA GCCGAGTACTACAAGATCAAGATTTCCGACCTGCTCTCCAAGCGCCGCTCGCGCTCGGTGGCGCGGCCGCGCCAGGTTGCGATGGCGTTGTCGAAAGAGC TGACCAACCACAGCCTGCCTGAAATCGGCGATGCCTTTGGCGGGCGGGATCACACGACGGTGTTGCATGCCTGTCGTAAGATTGCTGAACTTCGCGAGCT GGATGCGGATATTCGTGAAGATTACAAAAACCTGCTGCGCACTTTGACGACTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGACTGCGGCCAATTAAATAGGCAAGGGACCAGACCATGCATTTCACTATTCAACGCGAAGCCCTGTTGAAACCTCTGCAGTTGGTTGCCGGTGTTGTC GAACGGCGCCAGACCTTGCCGGTGTTGTCCAACGTCTTGCTGGTTGTGCAGGATCATCAGCTGTCCCTGACCGGTACCGACCTTGAAGTCGAACTGGTTG GCCGAGTTGCGCTTGAGGACGCCTCCGAGCCTGGCGAGATCACCGTACCGGCGCGCAAACTTATGGATATCTGCAAGAGCCTGCAGCCCGATGCACTGAT CGACATTCGTTTGGACGACCAGAAGGTCGTGATCAAGTCCGGGCGTAGCCGGTTCTCGCTGTCCACCTTGCCGGCCAATGATTTCCCTACGGTCGAAGAA GGCCCGGGCTCGCTGAACTTCAGCGTCAATCAAGGCAAGATGCGTCGTTTGATCGAGCGCAGCAGCTTCGCGATGGCCCAGCAGGACGTTCGCTACTACC
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| Amino Acid Sequence |
>chromosomal replication initiation protein
MSVELWQQCIDLLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLSRLLELLSERATGLAPSLSLLIGSKRTAAAPQSLASATRNQQPI GSPAAAAPPQAGPAEAPVMAAVEASPTVAPARAERNVQVEGGLKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMH AVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFAKKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIDGLEERLK SRFGWGLTVAVEPPELETRVAILMKKADQANVDLPHDAAFFIAQRIRSNVRELEGALKRVIAHAHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTV AEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDAFGGRDHTTVLHACRKIAELRELDADIREDYKNLLRTLTT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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