Pseudomonas stutzeri MF28, L686_20395
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri MF28 contig43, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCGGATAACGTGCATGGAACTCCGGCAGTGCTGGCACCAGAATGAGCCGGGCAAGCGGGCTGGGCACATCCACTCGCAGCCGGCCCCTGGGCGATGCCG CAGCGCTGGACAGGCTGGTCTCGGCATCATCCAGATCGGCCAGCAGGCGTAGCACGCGCTCGTAGTAAGCGGTGCCGTCGGCCGTGACCTTGACCTTGCG CGTGGTGCGATTGAGCAACCTGACGCGCAACCGAGCCTCGAGTTGCTGCACCAGTTGCGTCACCGTGGTCTTGCTCATATGCAACGTCTCGGCTGCCTTG GTGAAGCTGCCGGTCTCGACCACCCGGGCGAAGGCCCTCATCGCATCGAAACGATCCATCTCTGCTCTCTCCCAAAGATTGTTTGGATTTTACAAACATT GATGGGTAGACGCGCCAGTCTATCGCCAAGGCGCGCGCACCTAGATCGGGCCCATCATCAATCACCGGTCGGCGACGACCTGTAGCAGAGGAACTATCCA
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| DNA Sequence for Gene |
>L686_20395
ATGACCCCGCGTGACGTTGTTTTTCCAGCTGGCCGCCAGGCGCTCTACGAGCGCAATCGCTATTCGCCGGCGATCCGTTCCAACGGCTTTCTGTTCGTTT CGGGGCAGGTCGGCAGCCGCGAGGACGGTTCGCCTGAGCCCGATCTCGAAGCGCAGGTGCGACGCGCGTTCGACAACCTGAACGCCATCTTGCGGGCGGC TGACTGCACCTTCGATGACGTGGTGGATGTCAGCATCTTCATGGTCGATGCGCAGGCGACGTTCGAAACCGTCTGGAAGATCGTTCCCGAGTACTGGGGG CAGGCACCGCACCCGACGCTGACCGCCGTCGGTGTCACCTGGCTGTATGGCTTCCAGTTCGAGATCAAGGTGATCGCGAAGCTGCCGGAGAAGGTCGAGG TCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCCATGTCGCGCCGTCTGCAGGCGCTGCCGACATGGATGCCTTGCAGCACGGCGCGAGGCCGTTGGTCGGTGGCCGGCGCGGTGCGCTGCCCAGCCCCT GATATAGCCCGGCGCTGGCGCCCGTCACGCTTGTCCGGTTGTCCAAAACATTCAGCCAGCTTGGTGGCTTTTGCCATTGTTGCCGGTGACACGCGACGCC ACTATCGGGGCACCTCATAACAATAAATCCAGGAGCCAGCCATGCGCGATTACGTCACTGCGGCCAGCGAGTTCGACTACGACCAGACGGTGTCGGCCAT TCTCTCGGGCGACTTGTCGGCGATGAATGCCTGCGTCGAGTGCTGCGACCGGCATGCCGCCTCGGACAAGGTCGCGCTCCGCTGGGAAGGTCGCGACGGG CAGCGGGCCGACTGGACCTTCGCACTGCTCAAGGCCGCCGCCGCGCGCTTTGCCAATCTTCTCGACAGCTATGGCATCAAGCCGGGCGATACCGTCGCCG
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| Amino Acid Sequence |
>endoribonuclease L-PSP
MTPRDVVFPAGRQALYERNRYSPAIRSNGFLFVSGQVGSREDGSPEPDLEAQVRRAFDNLNAILRAADCTFDDVVDVSIFMVDAQATFETVWKIVPEYWG QAPHPTLTAVGVTWLYGFQFEIKVIAKLPEKVEV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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