Strain | Pseudomonas stutzeri MF28 contig40, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCTGCGTGACGAGCAGATCAGGCGCCGTTGGCATGCGTTCATCCTGCGCATTCCACTGGTGGGCCGGCTGGCACGGGCGACCAATACCGCGCGCTTCG CCTCGACCCTGGCAATCCTCACCCGCAGCGGCGTACCGCTGGTGGATGCGCTGGGCATCGCTGCCGCCGTGATCGCCAACCTGCGCATTCGCGACCGTGT GATCGAGGCAGCGCAGCGCGTGCGTGAAGGCGGTAGCCTGACCCGCGCGCTGGACGCCACCGGCGAATTCCCGCCGATGATGCTGCACATGATCGCCAGC GGCGAGAAGTCCGGCGAGCTGGATCAGATGCTGGCGCGCACCGCCCGCAATCAGGAGAACGATCTGGCCGCGCAGATCTCGCTGATGGTGGGACTTTTCG AACCCTTCATGCTGGTGTTCATGGGGGCTGTGGTATTGGTGATCGTCCTGGCGATCCTGCTGCCGATTCTTTCTCTCAATCAACTGGTGGGCTAGTGAGC
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DNA Sequence for Gene |
>L686_19385
ATGACGTTGAACGAACGCAAACAGGGGGGCTTCACCCTCATCGAAATCATGGTGGTGGTGGTCATCCTCGGCATTCTTGCCGCGCTGGTGGTGCCGCAGG TGATGAACCGGCCGGATCAGGCCAAGGTGACCGTGGCCAAGGGCGACATCAAGGCCATCGGTGCGGCCCTGGACATGTACAAGCTGGACAACTACTCCTA CCCCAGCACCCAGCAGGGCCTGGATGCGCTGGTGGAAAAGCCCAGCGGCAATCCACAGCCGAAGAACTGGAACCGCGACGGCTATCTCAAGCGCGTACCC AAGGACCCTTGGGGCAACGAGTACCAGTACCTGTCGCCGGGCACCAAGGGCGGCCAGTACGACCTTTATTCCTACGGCGCCGATGGCAAGCAGGGCGGCT CCGATCTGAACGCGGACATTGGTAACTGGGATCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCATGCCTCGAGCGCGCCGGGAGGGCGGCTTCACGCTGGTCGAGCTGATGGTCGTCATCGTCATCCTCGGCAGCCTGGTGGGCCTGGCGGTGCTCTCGA TGGGCAACACCAGCTCGTCGCGCGAGCTACGCGACGAAGCGCAGCGACTGGCGATCCTGATCAGCCTGATGGCCGACGAAGCGGTGCTCGACAACCGTGA GTACGGCCTGCTGATCAGCCGCGACGGTTATCGGCTGATGCGCTACGACGAAGCCGATGCGCGCTGGCGCGATGCGGGCAACGACAAGGCGCACCGTGCT CCGGACTGGATGCGCCTGGAACTGCAGCTCGATGGCGCCCCATTGAAACTGGTGGCGCCGGTCAAGCGCGAGGATGATCCCATCGGGCTGTCCGACAAGC GCGACCGTGAACGGCGGCGAGCCCCGCGGGTGCAGCCGCAGCTGTTGATCCTGTCCAGCGGCGAACTGTCGCCGTTCTCCCTGACCTTTATCGATCAACG
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Amino Acid Sequence |
>secretion system protein G
MTLNERKQGGFTLIEIMVVVVILGILAALVVPQVMNRPDQAKVTVAKGDIKAIGAALDMYKLDNYSYPSTQQGLDALVEKPSGNPQPKNWNRDGYLKRVP KDPWGNEYQYLSPGTKGGQYDLYSYGADGKQGGSDLNADIGNWDL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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