Strain | Pseudomonas stutzeri MF28 contig34, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCAAACCGTTCAAGCAAGTCTTCCCCTGAGTCGATCGCCCACGCCACAGCTACGGTCAGGCCGCGATTCTGCGGCCGTTGAGGAAAAAGGAGTTCCGATG CGCCAAGGTTCGCTGCCCCTGATGCTTGTTCTGAGTCTTGCCATGGCTTCGGCACAAGCTGACGAAGATACGACCGCCCCAACCCTCGAACAGCAGGTTG AACTGACGCAAAGCCTGCCCGAGAACGAGGTGCAACGTGAATCGCTGAGCACCGGCCTCGATACGGCCATCGCCGACGCCGAACGGGCTCAGCTGTCGCA TCTGCGCCAGGAGAACCATCGGCTGCGTATGCAGCTGCAACAGGGACAACCGAAGCTACAGCCGCCCCTGCTGAACGACCAGCAACAGTGGTTTGCCGTC GGTGGGGGCGTCGGAGTGTTGGGTTTTCTGCTCGGCGTGCTGACCACCCGGGGACGCCGGCGCCGGCAATGGCTGAATTGAAGCGAGTACGAGCAAGAGC
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DNA Sequence for Gene |
>L686_17970
ATGAGCGAACTGCTACTGATCGACGATGATGAAGAACTCTGCGAACTGTTGGTCAGTTGGCTGGCCCAGGAAGGGTTCGTCGCCCACGCCTGTCATGACG GACAGAGCGCACGCGCAGCGCTGGCCGAGCATCAACCGGCGGCGGTGGTCCTCGATGTGATGCTGCCCGACGGCAGTGGCCTCGAACTGCTCAAGCAACT GCGTAGCGAACATCCCGACCTGCCGGTATTGATGCTCTCAGGCCGCGGTGAGCCGCTGGACCGCATTCTTGGCCTGGAGCTCGGCGCCGATGATTATCTG GCCAAGCCATGCGACCCCCGCGAGCTCACCGCGCGGCTACGCGCAGTGCTGCGGCGCAGCCAACCTGCGAGCGCGCCGACCCAGCTGGAGCTGGGCGACC TTTGCTACAGCCCGGCCCGCGGCGTTGCCAATGTCGGCGAGCATGAAGTGACCCTGACCTTGTCCGAGGGGCGTATCCTCGAGGCGCTGCTCAGCCAGCC CGGTGAGCCGCTCGACAAGCAAGCCCTGGCGCAGCTCGCGCTGGGACGCAAACTGACCTTGTACGACCGCAGCCTGGACATGCACGTTAGCAACCTGCGC CGCAAGCTCGGGCCGCATTCCGACGGGCGTCCACGCATAGTCGCACTGCGCAGCCGCGGCTACCTCTACGCTTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGGCTTTACCCAGCCTTTACCCTGAGCTGACCGCGCTTGACCTTGCGGGCCATAGACTGTGCTCATCCGGTCGAAGCCAGAACCTGTAAAGGCCCTTCT GGGGATCGGTTTCCATCTACAGGAGAAACCATCATGCGCAAGACAGTGATCGCCCTGCTATTCGCCTCTACCCTCCCCGCCGTTGCCATGGCCATGCCCG AAGACGGCCAACACCACCGTAGAGAACACACGCCGTTCGAGCAGCTCGACCTGACCAAGGAGCAGCAAAGCCAGATGCGCAAGCTGATGGGCGAGCAGAT GCAGACCCACCGTGAGATCACCCAGCGCTACCTAGACAAGCTGCCCAAAGCCGAGCGCAAGGCGATGCAGGACGAACTGGCCAGCAGCCAGGCAAAGACG CACAAGCAGATGCGTGATCTGCTCAAGCCTGAACAGCAGAAGCAATTCGACGAGATGCACAAGAAGATGGAAGCCAAGCGAGCCGAACGTGCCGAGTTCA
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Amino Acid Sequence |
>chemotaxis protein CheY
MSELLLIDDDEELCELLVSWLAQEGFVAHACHDGQSARAALAEHQPAAVVLDVMLPDGSGLELLKQLRSEHPDLPVLMLSGRGEPLDRILGLELGADDYL AKPCDPRELTARLRAVLRRSQPASAPTQLELGDLCYSPARGVANVGEHEVTLTLSEGRILEALLSQPGEPLDKQALAQLALGRKLTLYDRSLDMHVSNLR RKLGPHSDGRPRIVALRSRGYLYAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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