Pseudomonas stutzeri MF28, L686_16135
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri MF28 contig30, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGCGGCGCGTCAATGCGGCCTGCTCATCGTGCACACTCGCGAAGGCCATCGCGCCGACCTGAGCGCTCTGCCCGACACCAAGCGCCGACGTGCAGAAG CCAGCGGCGCGCCGATTGGAAGCCCCGGTCCCATGGGCCGTCTCATGGTGCGCGGTGAATACGGCAATGACCTTATCGACGAGCTCAGGCCCGAACCCGG CGAGCCGGTGATCGACAAGCCCGGTTACAGTGCCTTCGCCCACACGGACCTTGAGTTGCTACTGCATAACCGCGGCGTTCGGCAATTAATCCTGACCGGC GTGACCACCGAAGTCTGCGTGTCCTCGACGCTGCGCCAGGCGGTCGACCTGGGCTATGCCTGCCTGACCGTCGCCGACGCCTGCGGCTCGGCCTACCCCG CGCTGCATGCCGCGGCGCTGTCGATGATAGGCGTCGAGGGCGGGCTGTTCGGCCAAGTCATCACCAGCGATGCACTGATTGCCTTGCTGGAGATGCCCGC
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| DNA Sequence for Gene |
>L686_16135
ATGACCGACGTGCTCAAGCTCTGGCCACTGCTTACCGCCACCCATCGCTACGACAAGTCGATTTCTACCCGCAACCGCGGCCAGGGTATCCAGATCGAGG CGCCGATCCTGGCGTTTCTGATCGAGACCCGGCAAGGGCGAATCCTCTTCGATGTCGGCTGCGACTACGCCAAGCTCAGCGATCCGGTCCTCAAAGCGCG TTGGTACGACCCGATGGAGTTCCCGATGGGGCCACCGAACATGCGTGAAGACCAGCGCCTGCCCGCCCATCTGGCCCGCCATGGACTGACGCCGGCCGAC ATCGACCTGGTGTTTCTCAGCCACCTGCATTTCGACCATGCCGGTGGGCTGTGCGAAGTCTGCGGCTGCGACGTGCATGTGCACGAAGCAGAACTGGCAG CCGCCCGTACCCAGGCCGACGACGCCTACTTCACCGATGATTTCGCCGGTGCGTTCGTTGACCAGAACAGCTGGAAGCTCCAGCGCGACGAATACCAACT GGTTCCCGGCGTGCAGTCAATCAATACGCCGGGACACACCGCCGGCCACATGTCGCTGCTGATCGAACTGCCTCATGGCAAGCCAGTAGTCCTGACCGGA GACGCGGCCGACCTGCAGGAAAACCTCACCGATGAAATTGCACCCGGTCTGTGCTGGCAGGACCGCGAGGATCTGGCGCTGGCCAGCATCCTCAAGCTCA AGGGATTGGCCGCCGAAACCGAAGCCGAGCTGTGGCCCAACCACGACATGGCCTTCTGGCGAACCCTCAAACGATTCCCGGAGTACCACGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACCCGTTCCCGAGCCTTATCTGGGTGTATGGCGCCGTCGCCTGCTGACCACCACAGCCGGTCATTACGACGAAACCAGCGAGGTGTATTGGCTACAAAC GGCGCAGCTGCACGCAGACATTCGCATTCCACACCCTCGGACCACGCCGCCGTCCGCTTCCCTCGCGACTTGTACCCACGCGCAGCAGCTCGCCCTATGC GAACAAGCGGGCTTCGCCGGCTTGACCGATGTGCAGGAAAATATTTGCCAATGGCATCGGCTGATTGATTACCAGCCGCCAGGCGGCGCACCAGACATCG GTTGTATGAAGTTCGAGGGAGCGGATCGCCTGCTCGAAGACGCTTTGGACGGTAGCTATCATGAGGTCTGGCAGCGCGTACCAGAGTCCCAGGGCACCAA CTGGGGCCTGTGGTTGCGTTCGGCGGACGAGCCGGAGCGTCAGGCTTGCCTGCTGGTCGCCGGTGACTACTTCATGTTCGCTGCAGACAGGTCGGCAGCG
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| Amino Acid Sequence |
>beta-lactamase
MTDVLKLWPLLTATHRYDKSISTRNRGQGIQIEAPILAFLIETRQGRILFDVGCDYAKLSDPVLKARWYDPMEFPMGPPNMREDQRLPAHLARHGLTPAD IDLVFLSHLHFDHAGGLCEVCGCDVHVHEAELAAARTQADDAYFTDDFAGAFVDQNSWKLQRDEYQLVPGVQSINTPGHTAGHMSLLIELPHGKPVVLTG DAADLQENLTDEIAPGLCWQDREDLALASILKLKGLAAETEAELWPNHDMAFWRTLKRFPEYHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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