Strain | Pseudomonas stutzeri MF28 contig28, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCCGCTGGCTGGCAGTTGACGTCTGAACAGTTGCGGCGACATACCGGGCAGTGCCGGCCGGTAGCGGTCGGGCAGTGGTTGGCAGCGTCCTGCCACGAT GCCGAAGAGCTGGCCATGGCAATGGCGTTGGGAGTAGATTTCGTCACGTTGTCGCCGGTCCTGTCGACCCCGACGCACCCCGAGGCCGCTCCGCTGGGGT GGGCTCGGGTAGCGGAACTGCTGCAAGGCTTCAACCACCCGGCGTTCGTGCTTGGTGGCATGACGCCAGCGCATCTATCAACAGCGCGCCAAGCGGGTGC GCAGGGCGTGGCGGCGATAAGGGCGCTATGGCCCGCTGAACCTGCTTGACGATTGCCGGTCGATGGCACAGGGTCGCGCGTTACTTGAGTTTCGATAGGG AAAAGTAATAATGCCTATTCCCTTAATCAATTAACCGTATGCGGCCAGCTGCGTTATCGTAGGCCTCGTAAATTTCTGAACCCCCTGAAGGAGTTAGCAG
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DNA Sequence for Gene |
>L686_15820
ATGTCTCTGATCAATACCCAAGTCCAGCCGTTCAAGGTCAACGCATTTCACAACGGCAAGTTCATCGAAGTCACCGAAGAATCCCTGAAGGGCAAGTGGT CGGTACTGATCTTCATGCCGGCGGCCTTCACCTTCAACTGCCCGACCGAGATCGAAGACGCGGCCAACAACTACGCCGAGTTCCAGAAGGCGGGTGCCGA GGTGTATATCGTCACCACCGACACTCATTTCTCGCACAAGGTTTGGCATGAAACCTCGCCAGCCGTTGGCAAGGCTCAGTTCCCGCTGATCGGTGATCCG ACCCACCAGCTGACCAACGCCTTTGGCGTGCACATCGCCGAAGAAGGCCTGGCGCTGCGTGGCACCTTCATCATCAACCCGGAAGGCCAGATCAAGACCC TGGAAATCCACTCCAACGAAATTGCGCGTGACGTCGGCGAAACCCTGCGCAAGCTGAAAGCTGCCCAGTACACCGCCGCGCACCCGGGCGAAGTTTGCCC GGCCAAGTGGAAAGAAGGCGAGAAGACCCTGGCTCCTTCGCTGGACCTGGTCGGCAAGATCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGGTCGGCAGGCGCTGCGCTTAGCCGCAGCGCCTCAGTACCGTTCTCGGGCAGCGTATCGCTCCGAGACACCAAACGCCTGGACGCGAAACGTCCGGGC GTTTTATTAATCGAATTCTGCAAGTCGGGAGTCGCTGTTCATGTTGGACACCAATCTCAAAGCGCAACTGAAAACCT
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Amino Acid Sequence |
>alkyl hydroperoxide reductase subunit C
MSLINTQVQPFKVNAFHNGKFIEVTEESLKGKWSVLIFMPAAFTFNCPTEIEDAANNYAEFQKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLIGDP THQLTNAFGVHIAEEGLALRGTFIINPEGQIKTLEIHSNEIARDVGETLRKLKAAQYTAAHPGEVCPAKWKEGEKTLAPSLDLVGKI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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