Pseudomonas stutzeri MF28, L686_14850 (zipA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri MF28 contig25, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGAACAGCACCATCCACCTGCTATCAGGCGGTGAGAAGGCGTTGACCGCTCTGGCGCTGGTATTTGCGATTTTCCAGCTCAACCCGGCGCCGTTCTGCAT GCTCGATGAAGTGGATGCACCGCTGGACGACGCCAACGTCGGGCGCTATGCGCGCCTGGTCAAGGAGATGTCGGAAAAGGTGCAGTTCATCTACATCACG CATAACAAGATCGCGATGGAGATGGCTGACCAGTTGATGGGGGTGACCATGCATGAGCCGGGTTGCTCGAGACTGGTGGCGGTCGATGTGGAGCAGGCGG TTGCATTGGCGGAGGCCTGAGCGGCGCGCGCTCCAGACAGATTGAGGACAAGCGCAGACCAATAAAAGAGCCGCGCCGGGCGGTGCACATCTACCGTTCG TCGTGCTAGTTTAGGGCGCAATTTTTACGATGCGCAGATGAGCCTGTTCAGCGGCTGTGAATCTGCGTCTTTATCATCGATTTCAGGGGTTTAAGCATTA
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| DNA Sequence for Gene |
>L686_14850
|zipA
ATGGATATCGGTCTGCGCGAGTGGCTGATCGTCATCGGCATCATTGTTATCGCCGGCATTCTTTTCGATGGCTGGCGGAGGATGCGCGGTAGCAAGGGCA AGTTGAAGTTCAAGCTGGACCGTAATATCGCGAACAACCTCCCGGAGGACGACGATTCCAACGAGTTGCTGGGGCCGCCCCGCGTGGTGAGTCGCAGCAA TGAGCCATCGCTGGACGAAGCGGATCTGCCTTCGATGAGCGCCCGCGAAACCGGCAAGCGTCGCCCAACAGAACCTCAGCAAGGAGACCTTCGTTTCTCC AGCGACGACGCGCCGGTGCCGACGTTGCTCGACCCGGTTGCAGACGATGAAGAAGGGAAGCCAGACGAGTCCGGCCAGGACCTGCCGCCGGTCGAAGAGG TGTTGGTCATCAACGTGATTTCCCGTGACCCGCATGGCTTCCGCGGCCCCGCCTTGCTGCAGAACATTCTCGAGAGTGGCCTGAGATTCGGCGAGATGGA CATATTTCACCGTCACGAGAGCATGGCCGGCAATGGCGAGGTGCTGTTCTCCATGGCCAACGCTGTCAAACCCGGTACGTTCGACCTGGACGACATCGAC CATTTCACCACGCCGGCCGTGAGCTTCTTCCTCGGCCTGCCCGGGCCGCGGTACCCGAAGCAAGCCTTCGACGTGATGGTCGCCGCTGCTCGAAAGCTGT CTCAGGAGCTGAACGGCGAACTCAAGGACGACCAGCGCAGCGTGCTCACCGCACAAACCATCGAGCATTATCGCCAACGTATCGTTGACTACGAACGTCG GCAGATGACTACCAAGCGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCCAGAACCGCTCTCAGGAGCGGTTCTTTTTTGCCGCCAGGCTGCCCAAAGCATCGCTCCGGGTCGGGCCTCATACAGAAGAGCCAAAGCCCCACCCGC ACCGCTTTTTTATGCGAGGCGCGCCCCGCGGCGAATAAGAGTTCCTGCCTGCTAAGAAGCAAAAGCTTCGCCCCGAGGCGGGCCTCCCACCAGAGCGCTG CGTGCAGGTCACCCCACAGGCTTCTGCTCAGCCAGAGACATCAGACACCCCAGCCCAACCGAACTGCATACCCAGGGCCACCAGGCACGCGCCAACCCGG TGGGGTCACAGCCGCAGGACTGTCAGATCCGTGGGAGGCTCCGCGGCGAATGCAGGCCGCAGGCCTGCCGTCACTTTCGTAATCGGCTAAAATCTCGCGC CTACATATCAACCAAGGCGTGCAGATACTGTCTGTATCTGCACTGCCATAGCTACGGCTCCGTCATATGCCTTCCGCCCAAACCGCCGCAGAGCGCATCG
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| Amino Acid Sequence |
>cell division protein ZipA
MDIGLREWLIVIGIIVIAGILFDGWRRMRGSKGKLKFKLDRNIANNLPEDDDSNELLGPPRVVSRSNEPSLDEADLPSMSARETGKRRPTEPQQGDLRFS SDDAPVPTLLDPVADDEEGKPDESGQDLPPVEEVLVINVISRDPHGFRGPALLQNILESGLRFGEMDIFHRHESMAGNGEVLFSMANAVKPGTFDLDDID HFTTPAVSFFLGLPGPRYPKQAFDVMVAAARKLSQELNGELKDDQRSVLTAQTIEHYRQRIVDYERRQMTTKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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