Pseudomonas stutzeri MF28, L686_12905
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri MF28 contig23, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAGGAGGGGGTGGAGAACCTGCAGTCCACGTTGCGCGCTTGTGGGGATCTGGAACAGCAGGCGGCGCGGTTGAAGCAGTTGGTGGGGAGTTTTCGGATC TGATCCGGGGATGATGTTAAGGGCGCTTCGGCGCCCTTTTTTATTTTGACGAGTTCCACTGCCGTAGGGGCTTGGGTTACGGAGTCCCTGCTGCGAGGCG TTGTGCTTCGGGCTCGTGTGGTTAACCCATTGGCCGGGTTGTTTTAGGCATTGGTTTCGCCCTGCTGGGCGAAACCATTGCTTCAGCCCACTCTATAACC GCTATGTCACCGATCTCGAAATCATAAAAGTTCTTGCGCAGCCCTAGCCAAGCACGTGGTACGGCACTGTCAAAGTGCTAAGTTCGTGGTGGGGCGACCA CGGCCTCGGTGCCGCCATCGCGATTGACCCATTCCCCACTCCCATGGTCGAGATGAACCAAGGCCCGCAACCGCCGGGCCACCCGACCACAGGAGATCTC
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| DNA Sequence for Gene |
>L686_12905
ATGAAAATCCTCATCGTCCTCACCTCCCACGACAAGCTCGGCGATACCGGCAAATCCACCGGCTTCTGGCTCGAAGAATTCGCCGCGCCGTATTACGTCT TCAAGGACGCCGGCGCCGAGATCGTGTTGGCCTCGCCCAAGGGCGGGCAGCCGCCGCTGGATCCGAAAAGCGATGCGCCGGACGCCCAGACCGAGATGAC CAAGCGCTTCAAGAACGATGCCGAGGGCCAGGCGCTGTTGGCCAACACCCACAAGCTGGACGAGGTATCGGCGGAGGACTTCGATGCGGTGTTCTACCCC GGCGGCCACGGTCCGCTCTGGGACCTGACCGGTAACGCCAAGTCCATCGCCCTGATCGAATCCTTCATTCAGGCACGCAAGCCGGTGGCGGCGGTTTGCC ATGCGCCGGCGGCGCTGGTTCAGGTGCGCGGGGTGGATGGCGAGTACCTGGTCAAGGGCAAGCAGGTGACCGGCTTCACCAACACCGAGGAGGAGGGCGT GCAGCTCACCGAGGTGGTGCCCTTCCTGCTGGAAGAAAAACTGAAGGAGATTGGCGGCGACTACAGCAAGGGCCCGGACTGGGCGTCTTATGTGCGGGTC GACGGCCTGCTCGTCACGGGCCAGAACCCAGCATCTTCGGAAGAGGCCGCCCGCGAGCTGCTCAAGCTGCTGAAGACTGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTCGCTCAGCTCGCCGCTTCGCTCGGCCATGCCAGGGAAGCGGCGTGGCTGCAGGTCTCGAACAGCGGTTTGCTGAACAGGTAGCCCTGCATGAGGCT GATCCCCAGGTCGCGCAAGGCCTTGCCCTCATCCGGCGTTTCCACGCCTTCGGCGATCACCTGAATGCCCAGCTCCGTGCAGATCCCCACCGTGCCGCGG ACGATGGCCTGGCGCGAGCGGCTCTGGTCGATACCGCGAATCAGATCCATGTCCAGCTTGATCAGGTCGGGCTGAAAATCGGCGAGCAGGTTGAGCCCGG CAAAGCCGGCGCCGAAGTCGTCGATGGCCGTAAGAAAGCCGATGCGCTGGTATTCACGGAAGACCTCGGTCAGCCACTTGGCATCGCTGATGCGCTCGCC TTCGACGGTTTCGAAGATGATCCTTTCGATGGGGAAGTTGTGAGCTCGGGCGGCCTCCAGCGTCGAGCGGATGCACAGCTCCGGTCGGTAGATGGCGTTG
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| Amino Acid Sequence |
>dimethylallyltransferase
MKILIVLTSHDKLGDTGKSTGFWLEEFAAPYYVFKDAGAEIVLASPKGGQPPLDPKSDAPDAQTEMTKRFKNDAEGQALLANTHKLDEVSAEDFDAVFYP GGHGPLWDLTGNAKSIALIESFIQARKPVAAVCHAPAALVQVRGVDGEYLVKGKQVTGFTNTEEEGVQLTEVVPFLLEEKLKEIGGDYSKGPDWASYVRV DGLLVTGQNPASSEEAARELLKLLKTG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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